Gene : Bradi1g54510 B. distachyon v3.1
Defline:  (1 of 2) PTHR10261 - COATOMER SUBUNIT GAMMA Genomic Order:  6832
Name:  ? Bradi1g54510 Secondary Identifier:  ? PAC:32801391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54510 0.5kb upstream 0.5kb upstream 7118 true Bd1: 53057040-53064157 Brachypodium distachyon
Bradi1g54510 0.5kb upstream 0.5kb upstream 500 false Bd1: 53063658-53064157 Brachypodium distachyon
Bradi1g54510 0.5kb downstream 0.5kb downstream 7118 true Bd1: 53056540-53063657 Brachypodium distachyon
Bradi1g54510 0.5kb downstream 0.5kb downstream 500 false Bd1: 53056540-53057039 Brachypodium distachyon
Bradi1g54510 1.0kb upstream 1.0kb upstream 7618 true Bd1: 53057040-53064657 Brachypodium distachyon
Bradi1g54510 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53063658-53064657 Brachypodium distachyon
Bradi1g54510 1.0kb downstream 1.0kb downstream 7618 true Bd1: 53056040-53063657 Brachypodium distachyon
Bradi1g54510 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53056040-53057039 Brachypodium distachyon
Bradi1g54510 2.0kb upstream 2.0kb upstream 8618 true Bd1: 53057040-53065657 Brachypodium distachyon
Bradi1g54510 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53063658-53065657 Brachypodium distachyon
Bradi1g54510 2.0kb downstream 2.0kb downstream 8618 true Bd1: 53055040-53063657 Brachypodium distachyon
Bradi1g54510 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53055040-53057039 Brachypodium distachyon
Bradi1g54510 5.0kb upstream 5.0kb upstream 11618 true Bd1: 53057040-53068657 Brachypodium distachyon
Bradi1g54510 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53063658-53068657 Brachypodium distachyon
Bradi1g54510 5.0kb downstream 5.0kb downstream 11618 true Bd1: 53052040-53063657 Brachypodium distachyon
Bradi1g54510 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53052040-53057039 Brachypodium distachyon
Bradi1g54510 10.0kb upstream 10.0kb upstream 16618 true Bd1: 53057040-53073657 Brachypodium distachyon
Bradi1g54510 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53063658-53073657 Brachypodium distachyon
Bradi1g54510 10.0kb downstream 10.0kb downstream 16618 true Bd1: 53047040-53063657 Brachypodium distachyon
Bradi1g54510 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53047040-53057039 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575108 5269 Grass View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.891     High  
cufflinks 34.348     High  
cufflinks 32.265     High  
cufflinks 31.265     High  
cufflinks 17.691     High  
cufflinks 32.818     High  
cufflinks 28.302     High  
cufflinks 26.44     High  
cufflinks 32.094     High  
cufflinks 17.941     High  
cufflinks 10.684     High Low
cufflinks 32.93     High  
cufflinks 9.724     High Low
cufflinks 9.118     High Low
cufflinks 18.76     High  
cufflinks 37.197     High  
cufflinks 22.576     High  
cufflinks 69.377     High High
cufflinks 20.615     High  
cufflinks 9.936       Low
cufflinks 41.917     High High
cufflinks 30.544     High  
cufflinks 26.365     High  
cufflinks 32.124     High  
cufflinks 28.2     High  
cufflinks 26.472     High  
cufflinks 12.044     High Low
cufflinks 22.259     High  
cufflinks 23.789     High  
cufflinks 51.555     High High

0 Strain