Gene : Bradi5g16740 B. distachyon v3.1
Defline:  (1 of 2) PTHR10106//PTHR10106:SF17 - CYTOCHROME B561-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1914
Name:  ? Bradi5g16740 Secondary Identifier:  ? PAC:32811899
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g16740 0.5kb upstream 0.5kb upstream 3995 true Bd5: 20173157-20177151 Brachypodium distachyon
Bradi5g16740 0.5kb upstream 0.5kb upstream 500 false Bd5: 20176652-20177151 Brachypodium distachyon
Bradi5g16740 0.5kb downstream 0.5kb downstream 3995 true Bd5: 20172657-20176651 Brachypodium distachyon
Bradi5g16740 0.5kb downstream 0.5kb downstream 500 false Bd5: 20172657-20173156 Brachypodium distachyon
Bradi5g16740 1.0kb upstream 1.0kb upstream 4495 true Bd5: 20173157-20177651 Brachypodium distachyon
Bradi5g16740 1.0kb upstream 1.0kb upstream 1000 false Bd5: 20176652-20177651 Brachypodium distachyon
Bradi5g16740 1.0kb downstream 1.0kb downstream 4495 true Bd5: 20172157-20176651 Brachypodium distachyon
Bradi5g16740 1.0kb downstream 1.0kb downstream 1000 false Bd5: 20172157-20173156 Brachypodium distachyon
Bradi5g16740 2.0kb upstream 2.0kb upstream 5495 true Bd5: 20173157-20178651 Brachypodium distachyon
Bradi5g16740 2.0kb upstream 2.0kb upstream 2000 false Bd5: 20176652-20178651 Brachypodium distachyon
Bradi5g16740 2.0kb downstream 2.0kb downstream 5495 true Bd5: 20171157-20176651 Brachypodium distachyon
Bradi5g16740 2.0kb downstream 2.0kb downstream 2000 false Bd5: 20171157-20173156 Brachypodium distachyon
Bradi5g16740 5.0kb upstream 5.0kb upstream 8495 true Bd5: 20173157-20181651 Brachypodium distachyon
Bradi5g16740 5.0kb upstream 5.0kb upstream 5000 false Bd5: 20176652-20181651 Brachypodium distachyon
Bradi5g16740 5.0kb downstream 5.0kb downstream 8495 true Bd5: 20168157-20176651 Brachypodium distachyon
Bradi5g16740 5.0kb downstream 5.0kb downstream 5000 false Bd5: 20168157-20173156 Brachypodium distachyon
Bradi5g16740 10.0kb upstream 10.0kb upstream 13495 true Bd5: 20173157-20186651 Brachypodium distachyon
Bradi5g16740 10.0kb upstream 10.0kb upstream 10000 false Bd5: 20176652-20186651 Brachypodium distachyon
Bradi5g16740 10.0kb downstream 10.0kb downstream 13495 true Bd5: 20163157-20176651 Brachypodium distachyon
Bradi5g16740 10.0kb downstream 10.0kb downstream 10000 false Bd5: 20163157-20173156 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579837 5269 Grass View MSA
122048765 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121350477 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.816        
cufflinks 9.093        
cufflinks 9.087        
cufflinks 10.291        
cufflinks 20.943     High High
cufflinks 8.039        
cufflinks 11.007     High  
cufflinks 5.511       Low
cufflinks 5.816        
cufflinks 8.457        
cufflinks 7.393        
cufflinks 5.036       Low
cufflinks 8.665     High  
cufflinks 6.561        
cufflinks 8.403        
cufflinks 6.547        
cufflinks 7.376        
cufflinks 11.629     High  
cufflinks 26.414     High High
cufflinks 45.313     High High
cufflinks 6.069        
cufflinks 4.931       Low
cufflinks 6.341        
cufflinks 6.723        
cufflinks 9.571        
cufflinks 10.923     High  
cufflinks 8.322        
cufflinks 11.523     High  
cufflinks 8.289        
cufflinks 7.038        

0 Strain