Gene : Bradi1g50180 B. distachyon v3.1
Defline:  (1 of 1) K12668 - oligosaccharyltransferase complex subunit epsilon (OST2, DAD1) Genomic Order:  6299
Name:  ? Bradi1g50180 Secondary Identifier:  ? PAC:32791916
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50180 0.5kb upstream 0.5kb upstream 2509 true Bd1: 49012062-49014570 Brachypodium distachyon
Bradi1g50180 0.5kb upstream 0.5kb upstream 500 false Bd1: 49012062-49012561 Brachypodium distachyon
Bradi1g50180 0.5kb downstream 0.5kb downstream 2509 true Bd1: 49012562-49015070 Brachypodium distachyon
Bradi1g50180 0.5kb downstream 0.5kb downstream 500 false Bd1: 49014571-49015070 Brachypodium distachyon
Bradi1g50180 1.0kb upstream 1.0kb upstream 3009 true Bd1: 49011562-49014570 Brachypodium distachyon
Bradi1g50180 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49011562-49012561 Brachypodium distachyon
Bradi1g50180 1.0kb downstream 1.0kb downstream 3009 true Bd1: 49012562-49015570 Brachypodium distachyon
Bradi1g50180 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49014571-49015570 Brachypodium distachyon
Bradi1g50180 2.0kb upstream 2.0kb upstream 4009 true Bd1: 49010562-49014570 Brachypodium distachyon
Bradi1g50180 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49010562-49012561 Brachypodium distachyon
Bradi1g50180 2.0kb downstream 2.0kb downstream 4009 true Bd1: 49012562-49016570 Brachypodium distachyon
Bradi1g50180 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49014571-49016570 Brachypodium distachyon
Bradi1g50180 5.0kb upstream 5.0kb upstream 7009 true Bd1: 49007562-49014570 Brachypodium distachyon
Bradi1g50180 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49007562-49012561 Brachypodium distachyon
Bradi1g50180 5.0kb downstream 5.0kb downstream 7009 true Bd1: 49012562-49019570 Brachypodium distachyon
Bradi1g50180 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49014571-49019570 Brachypodium distachyon
Bradi1g50180 10.0kb upstream 10.0kb upstream 12009 true Bd1: 49002562-49014570 Brachypodium distachyon
Bradi1g50180 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49002562-49012561 Brachypodium distachyon
Bradi1g50180 10.0kb downstream 10.0kb downstream 12009 true Bd1: 49012562-49024570 Brachypodium distachyon
Bradi1g50180 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49014571-49024570 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579038 5269 Grass View MSA
122049085 5273 Angiosperm View MSA
121345892 5274 Embryophyte View MSA
123425631 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.898     High  
cufflinks 23.339     High  
cufflinks 20.471     High  
cufflinks 25.693     High  
cufflinks 27.923     High  
cufflinks 20.021     High  
cufflinks 21.744     High  
cufflinks 17.97     High  
cufflinks 20.976     High  
cufflinks 34.509     High High
cufflinks 11.151     High Low
cufflinks 16.212     High  
cufflinks 8.665     High Low
cufflinks 11.642     High Low
cufflinks 19.004     High  
cufflinks 20.418     High  
cufflinks 27.311     High  
cufflinks 35.602     High High
cufflinks 36.352     High High
cufflinks 30.731     High  
cufflinks 33.41     High  
cufflinks 17.687     High  
cufflinks 17.568     High  
cufflinks 19.777     High  
cufflinks 24.497     High  
cufflinks 34.342     High  
cufflinks 13.161     High Low
cufflinks 26.479     High  
cufflinks 20.581     High  
cufflinks 27.473     High  

0 Strain