Gene : Bradi1g50030 B. distachyon v3.1
Defline:  (1 of 2) 3.7.1.9 - 2-hydroxymuconate-6-semialdehyde hydrolase / 2-hydroxymuconate-semialdehyde hydrolase Genomic Order:  6279
Name:  ? Bradi1g50030 Secondary Identifier:  ? PAC:32803611
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50030 0.5kb upstream 0.5kb upstream 5881 true Bd1: 48840444-48846324 Brachypodium distachyon
Bradi1g50030 0.5kb upstream 0.5kb upstream 500 false Bd1: 48840444-48840943 Brachypodium distachyon
Bradi1g50030 0.5kb downstream 0.5kb downstream 5881 true Bd1: 48840944-48846824 Brachypodium distachyon
Bradi1g50030 0.5kb downstream 0.5kb downstream 500 false Bd1: 48846325-48846824 Brachypodium distachyon
Bradi1g50030 1.0kb upstream 1.0kb upstream 6381 true Bd1: 48839944-48846324 Brachypodium distachyon
Bradi1g50030 1.0kb upstream 1.0kb upstream 1000 false Bd1: 48839944-48840943 Brachypodium distachyon
Bradi1g50030 1.0kb downstream 1.0kb downstream 6381 true Bd1: 48840944-48847324 Brachypodium distachyon
Bradi1g50030 1.0kb downstream 1.0kb downstream 1000 false Bd1: 48846325-48847324 Brachypodium distachyon
Bradi1g50030 2.0kb upstream 2.0kb upstream 7381 true Bd1: 48838944-48846324 Brachypodium distachyon
Bradi1g50030 2.0kb upstream 2.0kb upstream 2000 false Bd1: 48838944-48840943 Brachypodium distachyon
Bradi1g50030 2.0kb downstream 2.0kb downstream 7381 true Bd1: 48840944-48848324 Brachypodium distachyon
Bradi1g50030 2.0kb downstream 2.0kb downstream 2000 false Bd1: 48846325-48848324 Brachypodium distachyon
Bradi1g50030 5.0kb upstream 5.0kb upstream 10381 true Bd1: 48835944-48846324 Brachypodium distachyon
Bradi1g50030 5.0kb upstream 5.0kb upstream 5000 false Bd1: 48835944-48840943 Brachypodium distachyon
Bradi1g50030 5.0kb downstream 5.0kb downstream 10381 true Bd1: 48840944-48851324 Brachypodium distachyon
Bradi1g50030 5.0kb downstream 5.0kb downstream 5000 false Bd1: 48846325-48851324 Brachypodium distachyon
Bradi1g50030 10.0kb upstream 10.0kb upstream 15381 true Bd1: 48830944-48846324 Brachypodium distachyon
Bradi1g50030 10.0kb upstream 10.0kb upstream 10000 false Bd1: 48830944-48840943 Brachypodium distachyon
Bradi1g50030 10.0kb downstream 10.0kb downstream 15381 true Bd1: 48840944-48856324 Brachypodium distachyon
Bradi1g50030 10.0kb downstream 10.0kb downstream 10000 false Bd1: 48846325-48856324 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041325 5273 Angiosperm View MSA
124568352 5269 Grass View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.614        
cufflinks 1.732        
cufflinks 1.951        
cufflinks 1.991        
cufflinks 3.064        
cufflinks 1.707        
cufflinks 2.068        
cufflinks 1.597        
cufflinks 1.836        
cufflinks 1.708        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.496        
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.086        
cufflinks 1.388        
cufflinks 2.613        
cufflinks 1.573        
cufflinks 4.25        
cufflinks 0.58        
cufflinks 2.163        
cufflinks 1.224        
cufflinks 2.022        
cufflinks 2.39        
cufflinks 2.063        
cufflinks 1.83        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.033        
cufflinks 1.959        
cufflinks 5.099        

0 Strain