Gene : Bradi1g50212 B. distachyon v3.1
Defline:  (1 of 1) PTHR24096:SF190 - EBONY Genomic Order:  6304
Name:  ? Bradi1g50212 Secondary Identifier:  ? PAC:32804721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50212 0.5kb upstream 0.5kb upstream 9400 true Bd1: 49024986-49034385 Brachypodium distachyon
Bradi1g50212 0.5kb upstream 0.5kb upstream 500 false Bd1: 49033886-49034385 Brachypodium distachyon
Bradi1g50212 0.5kb downstream 0.5kb downstream 9400 true Bd1: 49024486-49033885 Brachypodium distachyon
Bradi1g50212 0.5kb downstream 0.5kb downstream 500 false Bd1: 49024486-49024985 Brachypodium distachyon
Bradi1g50212 1.0kb upstream 1.0kb upstream 9900 true Bd1: 49024986-49034885 Brachypodium distachyon
Bradi1g50212 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49033886-49034885 Brachypodium distachyon
Bradi1g50212 1.0kb downstream 1.0kb downstream 9900 true Bd1: 49023986-49033885 Brachypodium distachyon
Bradi1g50212 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49023986-49024985 Brachypodium distachyon
Bradi1g50212 2.0kb upstream 2.0kb upstream 10900 true Bd1: 49024986-49035885 Brachypodium distachyon
Bradi1g50212 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49033886-49035885 Brachypodium distachyon
Bradi1g50212 2.0kb downstream 2.0kb downstream 10900 true Bd1: 49022986-49033885 Brachypodium distachyon
Bradi1g50212 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49022986-49024985 Brachypodium distachyon
Bradi1g50212 5.0kb upstream 5.0kb upstream 13900 true Bd1: 49024986-49038885 Brachypodium distachyon
Bradi1g50212 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49033886-49038885 Brachypodium distachyon
Bradi1g50212 5.0kb downstream 5.0kb downstream 13900 true Bd1: 49019986-49033885 Brachypodium distachyon
Bradi1g50212 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49019986-49024985 Brachypodium distachyon
Bradi1g50212 10.0kb upstream 10.0kb upstream 18900 true Bd1: 49024986-49043885 Brachypodium distachyon
Bradi1g50212 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49033886-49043885 Brachypodium distachyon
Bradi1g50212 10.0kb downstream 10.0kb downstream 18900 true Bd1: 49014986-49033885 Brachypodium distachyon
Bradi1g50212 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49014986-49024985 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568837 5269 Grass View MSA
122047218 5273 Angiosperm View MSA
121345046 5274 Embryophyte View MSA
123425856 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.59        
cufflinks 1.095        
cufflinks 1.083        
cufflinks 0.677        
cufflinks 0.13       Low
cufflinks 0.915        
cufflinks 0.761        
cufflinks 0.614        
cufflinks 0.896        
cufflinks 0.415        
cufflinks 0.851        
cufflinks 0.919        
cufflinks 0.619        
cufflinks 0.476        
cufflinks 0.336        
cufflinks 0.931        
cufflinks 0.122     Low Low
cufflinks 1.347       High
cufflinks 0.238        
cufflinks 0.537        
cufflinks 0.258        
cufflinks 1.141        
cufflinks 0.666        
cufflinks 0.514        
cufflinks 0.535        
cufflinks 0.785        
cufflinks 0.495        
cufflinks 0.687        
cufflinks 0.781        
cufflinks 0.919        

0 Strain