Gene : Bradi1g50530 B. distachyon v3.1
Defline:  (1 of 1) 2.7.9.5 - Phosphoglucan, water dikinase Genomic Order:  6344
Name:  ? Bradi1g50530 Secondary Identifier:  ? PAC:32798047
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6724 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50530 0.5kb upstream 0.5kb upstream 13752 true Bd1: 49302129-49315880 Brachypodium distachyon
Bradi1g50530 0.5kb upstream 0.5kb upstream 500 false Bd1: 49315381-49315880 Brachypodium distachyon
Bradi1g50530 0.5kb downstream 0.5kb downstream 13752 true Bd1: 49301629-49315380 Brachypodium distachyon
Bradi1g50530 0.5kb downstream 0.5kb downstream 500 false Bd1: 49301629-49302128 Brachypodium distachyon
Bradi1g50530 1.0kb upstream 1.0kb upstream 14252 true Bd1: 49302129-49316380 Brachypodium distachyon
Bradi1g50530 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49315381-49316380 Brachypodium distachyon
Bradi1g50530 1.0kb downstream 1.0kb downstream 14252 true Bd1: 49301129-49315380 Brachypodium distachyon
Bradi1g50530 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49301129-49302128 Brachypodium distachyon
Bradi1g50530 2.0kb upstream 2.0kb upstream 15252 true Bd1: 49302129-49317380 Brachypodium distachyon
Bradi1g50530 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49315381-49317380 Brachypodium distachyon
Bradi1g50530 2.0kb downstream 2.0kb downstream 15252 true Bd1: 49300129-49315380 Brachypodium distachyon
Bradi1g50530 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49300129-49302128 Brachypodium distachyon
Bradi1g50530 5.0kb upstream 5.0kb upstream 18252 true Bd1: 49302129-49320380 Brachypodium distachyon
Bradi1g50530 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49315381-49320380 Brachypodium distachyon
Bradi1g50530 5.0kb downstream 5.0kb downstream 18252 true Bd1: 49297129-49315380 Brachypodium distachyon
Bradi1g50530 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49297129-49302128 Brachypodium distachyon
Bradi1g50530 10.0kb upstream 10.0kb upstream 23252 true Bd1: 49302129-49325380 Brachypodium distachyon
Bradi1g50530 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49315381-49325380 Brachypodium distachyon
Bradi1g50530 10.0kb downstream 10.0kb downstream 23252 true Bd1: 49292129-49315380 Brachypodium distachyon
Bradi1g50530 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49292129-49302128 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578573 5269 Grass View MSA
122044534 5273 Angiosperm View MSA
121350283 5274 Embryophyte View MSA
123428238 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.339     High  
cufflinks 22.991     High High
cufflinks 17.516     High  
cufflinks 19.464     High  
cufflinks 8.587        
cufflinks 18.495     High  
cufflinks 18.704     High  
cufflinks 10.302     High  
cufflinks 15.622     High  
cufflinks 6.261       Low
cufflinks 21.252     High High
cufflinks 15.99     High  
cufflinks 19.422     High  
cufflinks 18.967     High  
cufflinks 10.559     High  
cufflinks 16.384     High  
cufflinks 7.169        
cufflinks 2.882       Low
cufflinks 9.603        
cufflinks 5.482       Low
cufflinks 5.305       Low
cufflinks 12.29     High  
cufflinks 11.939     High  
cufflinks 14.763     High  
cufflinks 16.165     High  
cufflinks 13.696     High  
cufflinks 18.504     High  
cufflinks 12.82     High  
cufflinks 12.1     High  
cufflinks 8.044        

0 Strain