Gene : Bradi1g50520 B. distachyon v3.1
Defline:  (1 of 1) PTHR35464:SF1 - F18O14.9 Genomic Order:  6341
Name:  ? Bradi1g50520 Secondary Identifier:  ? PAC:32802867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50520 0.5kb upstream 0.5kb upstream 3444 true Bd1: 49294003-49297446 Brachypodium distachyon
Bradi1g50520 0.5kb upstream 0.5kb upstream 500 false Bd1: 49296947-49297446 Brachypodium distachyon
Bradi1g50520 0.5kb downstream 0.5kb downstream 3444 true Bd1: 49293503-49296946 Brachypodium distachyon
Bradi1g50520 0.5kb downstream 0.5kb downstream 500 false Bd1: 49293503-49294002 Brachypodium distachyon
Bradi1g50520 1.0kb upstream 1.0kb upstream 3944 true Bd1: 49294003-49297946 Brachypodium distachyon
Bradi1g50520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49296947-49297946 Brachypodium distachyon
Bradi1g50520 1.0kb downstream 1.0kb downstream 3944 true Bd1: 49293003-49296946 Brachypodium distachyon
Bradi1g50520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49293003-49294002 Brachypodium distachyon
Bradi1g50520 2.0kb upstream 2.0kb upstream 4944 true Bd1: 49294003-49298946 Brachypodium distachyon
Bradi1g50520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49296947-49298946 Brachypodium distachyon
Bradi1g50520 2.0kb downstream 2.0kb downstream 4944 true Bd1: 49292003-49296946 Brachypodium distachyon
Bradi1g50520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49292003-49294002 Brachypodium distachyon
Bradi1g50520 5.0kb upstream 5.0kb upstream 7944 true Bd1: 49294003-49301946 Brachypodium distachyon
Bradi1g50520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49296947-49301946 Brachypodium distachyon
Bradi1g50520 5.0kb downstream 5.0kb downstream 7944 true Bd1: 49289003-49296946 Brachypodium distachyon
Bradi1g50520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49289003-49294002 Brachypodium distachyon
Bradi1g50520 10.0kb upstream 10.0kb upstream 12944 true Bd1: 49294003-49306946 Brachypodium distachyon
Bradi1g50520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49296947-49306946 Brachypodium distachyon
Bradi1g50520 10.0kb downstream 10.0kb downstream 12944 true Bd1: 49284003-49296946 Brachypodium distachyon
Bradi1g50520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49284003-49294002 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576565 5269 Grass View MSA
122043322 5273 Angiosperm View MSA
121347201 5274 Embryophyte View MSA
123427704 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.121        
cufflinks 7.257       High
cufflinks 4.714        
cufflinks 3.948        
cufflinks 2.518        
cufflinks 3.776        
cufflinks 7.016       High
cufflinks 2.247        
cufflinks 2.449        
cufflinks 2.635        
cufflinks 1.458       Low
cufflinks 2.677        
cufflinks 1.254       Low
cufflinks 1.305       Low
cufflinks 1.081       Low
cufflinks 4.468        
cufflinks 3.328        
cufflinks 11.152       High
cufflinks 8.241       High
cufflinks 3.082        
cufflinks 9.911       High
cufflinks 2.683        
cufflinks 2.409        
cufflinks 2.738        
cufflinks 3.682        
cufflinks 4.594        
cufflinks 2.475        
cufflinks 4.068        
cufflinks 3.37        
cufflinks 8.368       High

0 Strain