Gene : Bradi1g50510 B. distachyon v3.1
Defline:  (1 of 2) PF06592 - Protein of unknown function (DUF1138) (DUF1138) Genomic Order:  6340
Name:  ? Bradi1g50510 Secondary Identifier:  ? PAC:32798894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50510 0.5kb upstream 0.5kb upstream 2791 true Bd1: 49290717-49293507 Brachypodium distachyon
Bradi1g50510 0.5kb upstream 0.5kb upstream 500 false Bd1: 49290717-49291216 Brachypodium distachyon
Bradi1g50510 0.5kb downstream 0.5kb downstream 2791 true Bd1: 49291217-49294007 Brachypodium distachyon
Bradi1g50510 0.5kb downstream 0.5kb downstream 500 false Bd1: 49293508-49294007 Brachypodium distachyon
Bradi1g50510 1.0kb upstream 1.0kb upstream 3291 true Bd1: 49290217-49293507 Brachypodium distachyon
Bradi1g50510 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49290217-49291216 Brachypodium distachyon
Bradi1g50510 1.0kb downstream 1.0kb downstream 3291 true Bd1: 49291217-49294507 Brachypodium distachyon
Bradi1g50510 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49293508-49294507 Brachypodium distachyon
Bradi1g50510 2.0kb upstream 2.0kb upstream 4291 true Bd1: 49289217-49293507 Brachypodium distachyon
Bradi1g50510 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49289217-49291216 Brachypodium distachyon
Bradi1g50510 2.0kb downstream 2.0kb downstream 4291 true Bd1: 49291217-49295507 Brachypodium distachyon
Bradi1g50510 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49293508-49295507 Brachypodium distachyon
Bradi1g50510 5.0kb upstream 5.0kb upstream 7291 true Bd1: 49286217-49293507 Brachypodium distachyon
Bradi1g50510 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49286217-49291216 Brachypodium distachyon
Bradi1g50510 5.0kb downstream 5.0kb downstream 7291 true Bd1: 49291217-49298507 Brachypodium distachyon
Bradi1g50510 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49293508-49298507 Brachypodium distachyon
Bradi1g50510 10.0kb upstream 10.0kb upstream 12291 true Bd1: 49281217-49293507 Brachypodium distachyon
Bradi1g50510 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49281217-49291216 Brachypodium distachyon
Bradi1g50510 10.0kb downstream 10.0kb downstream 12291 true Bd1: 49291217-49303507 Brachypodium distachyon
Bradi1g50510 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49293508-49303507 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590665 5269 Grass View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.069     Low  
cufflinks 0.274        
cufflinks 0.125        
cufflinks 0.221        
cufflinks 0.153        
cufflinks 0.089     Low  
cufflinks 0.269        
cufflinks 0.026     Low Low
cufflinks 0.022     Low Low
cufflinks 0.054     Low  
cufflinks 0.133        
cufflinks 0.064     Low  
cufflinks 0.026     Low Low
cufflinks 0.084        
cufflinks 0.071     Low  
cufflinks 0.089     Low  
cufflinks 0.104     Low  
cufflinks 1.042       High
cufflinks 0.463       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.344       High
cufflinks 0.054     Low  
cufflinks 0.026     Low Low
cufflinks 0.142        
cufflinks 0.113        
cufflinks 0.24        
cufflinks 0.076     Low  
cufflinks 0.04     Low Low
cufflinks 0.063     Low  
cufflinks 0.177        

0 Strain