Gene : Bradi1g50650 B. distachyon v3.1
Defline:  (1 of 2) PF00004//PF07728 - ATPase family associated with various cellular activities (AAA) (AAA) // AAA domain (dynein-related subfamily) (AAA_5) Genomic Order:  6357
Name:  ? Bradi1g50650 Secondary Identifier:  ? PAC:32802875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g50650 0.5kb upstream 0.5kb upstream 3044 true Bd1: 49383285-49386328 Brachypodium distachyon
Bradi1g50650 0.5kb upstream 0.5kb upstream 500 false Bd1: 49383285-49383784 Brachypodium distachyon
Bradi1g50650 0.5kb downstream 0.5kb downstream 3044 true Bd1: 49383785-49386828 Brachypodium distachyon
Bradi1g50650 0.5kb downstream 0.5kb downstream 500 false Bd1: 49386329-49386828 Brachypodium distachyon
Bradi1g50650 1.0kb upstream 1.0kb upstream 3544 true Bd1: 49382785-49386328 Brachypodium distachyon
Bradi1g50650 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49382785-49383784 Brachypodium distachyon
Bradi1g50650 1.0kb downstream 1.0kb downstream 3544 true Bd1: 49383785-49387328 Brachypodium distachyon
Bradi1g50650 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49386329-49387328 Brachypodium distachyon
Bradi1g50650 2.0kb upstream 2.0kb upstream 4544 true Bd1: 49381785-49386328 Brachypodium distachyon
Bradi1g50650 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49381785-49383784 Brachypodium distachyon
Bradi1g50650 2.0kb downstream 2.0kb downstream 4544 true Bd1: 49383785-49388328 Brachypodium distachyon
Bradi1g50650 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49386329-49388328 Brachypodium distachyon
Bradi1g50650 5.0kb upstream 5.0kb upstream 7544 true Bd1: 49378785-49386328 Brachypodium distachyon
Bradi1g50650 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49378785-49383784 Brachypodium distachyon
Bradi1g50650 5.0kb downstream 5.0kb downstream 7544 true Bd1: 49383785-49391328 Brachypodium distachyon
Bradi1g50650 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49386329-49391328 Brachypodium distachyon
Bradi1g50650 10.0kb upstream 10.0kb upstream 12544 true Bd1: 49373785-49386328 Brachypodium distachyon
Bradi1g50650 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49373785-49383784 Brachypodium distachyon
Bradi1g50650 10.0kb downstream 10.0kb downstream 12544 true Bd1: 49383785-49396328 Brachypodium distachyon
Bradi1g50650 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49386329-49396328 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032336 5273 Angiosperm View MSA
124546000 5269 Grass View MSA
121352583 5274 Embryophyte View MSA
123382886 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain