Gene : Bradi5g15914 B. distachyon v3.1
Defline:  (1 of 2) PTHR11700:SF7 - 40S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  1814
Name:  ? Bradi5g15914 Secondary Identifier:  ? PAC:32808815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g15914 0.5kb upstream 0.5kb upstream 2916 true Bd5: 19494649-19497564 Brachypodium distachyon
Bradi5g15914 0.5kb upstream 0.5kb upstream 500 false Bd5: 19494649-19495148 Brachypodium distachyon
Bradi5g15914 0.5kb downstream 0.5kb downstream 2916 true Bd5: 19495149-19498064 Brachypodium distachyon
Bradi5g15914 0.5kb downstream 0.5kb downstream 500 false Bd5: 19497565-19498064 Brachypodium distachyon
Bradi5g15914 1.0kb upstream 1.0kb upstream 3416 true Bd5: 19494149-19497564 Brachypodium distachyon
Bradi5g15914 1.0kb upstream 1.0kb upstream 1000 false Bd5: 19494149-19495148 Brachypodium distachyon
Bradi5g15914 1.0kb downstream 1.0kb downstream 3416 true Bd5: 19495149-19498564 Brachypodium distachyon
Bradi5g15914 1.0kb downstream 1.0kb downstream 1000 false Bd5: 19497565-19498564 Brachypodium distachyon
Bradi5g15914 2.0kb upstream 2.0kb upstream 4416 true Bd5: 19493149-19497564 Brachypodium distachyon
Bradi5g15914 2.0kb upstream 2.0kb upstream 2000 false Bd5: 19493149-19495148 Brachypodium distachyon
Bradi5g15914 2.0kb downstream 2.0kb downstream 4416 true Bd5: 19495149-19499564 Brachypodium distachyon
Bradi5g15914 2.0kb downstream 2.0kb downstream 2000 false Bd5: 19497565-19499564 Brachypodium distachyon
Bradi5g15914 5.0kb upstream 5.0kb upstream 7416 true Bd5: 19490149-19497564 Brachypodium distachyon
Bradi5g15914 5.0kb upstream 5.0kb upstream 5000 false Bd5: 19490149-19495148 Brachypodium distachyon
Bradi5g15914 5.0kb downstream 5.0kb downstream 7416 true Bd5: 19495149-19502564 Brachypodium distachyon
Bradi5g15914 5.0kb downstream 5.0kb downstream 5000 false Bd5: 19497565-19502564 Brachypodium distachyon
Bradi5g15914 10.0kb upstream 10.0kb upstream 12416 true Bd5: 19485149-19497564 Brachypodium distachyon
Bradi5g15914 10.0kb upstream 10.0kb upstream 10000 false Bd5: 19485149-19495148 Brachypodium distachyon
Bradi5g15914 10.0kb downstream 10.0kb downstream 12416 true Bd5: 19495149-19507564 Brachypodium distachyon
Bradi5g15914 10.0kb downstream 10.0kb downstream 10000 false Bd5: 19497565-19507564 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
124545924 5269 Grass View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.628       Low
cufflinks 6.477        
cufflinks 5.612        
cufflinks 7.426       High
cufflinks 2.588       Low
cufflinks 5.533        
cufflinks 6.425        
cufflinks 5.157        
cufflinks 5.277        
cufflinks 6.301        
cufflinks 4.947        
cufflinks 4.453        
cufflinks 4.626        
cufflinks 5.192        
cufflinks 4.132        
cufflinks 5.483        
cufflinks 6.21        
cufflinks 6.685        
cufflinks 4.955        
cufflinks 6.23        
cufflinks 8.203       High
cufflinks 5.041        
cufflinks 4.986        
cufflinks 6.268        
cufflinks 7.139        
cufflinks 6.599        
cufflinks 6.373        
cufflinks 6.022        
cufflinks 4.985        
cufflinks 5.943        

0 Strain