Gene : Bradi1g51220 B. distachyon v3.1
Defline:  (1 of 1) PTHR11370 - DNA-REPAIR PROTEIN XRCC1 Genomic Order:  6430
Name:  ? Bradi1g51220 Secondary Identifier:  ? PAC:32793217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g51220 0.5kb upstream 0.5kb upstream 5075 true Bd1: 49827789-49832863 Brachypodium distachyon
Bradi1g51220 0.5kb upstream 0.5kb upstream 500 false Bd1: 49827789-49828288 Brachypodium distachyon
Bradi1g51220 0.5kb downstream 0.5kb downstream 5075 true Bd1: 49828289-49833363 Brachypodium distachyon
Bradi1g51220 0.5kb downstream 0.5kb downstream 500 false Bd1: 49832864-49833363 Brachypodium distachyon
Bradi1g51220 1.0kb upstream 1.0kb upstream 5575 true Bd1: 49827289-49832863 Brachypodium distachyon
Bradi1g51220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 49827289-49828288 Brachypodium distachyon
Bradi1g51220 1.0kb downstream 1.0kb downstream 5575 true Bd1: 49828289-49833863 Brachypodium distachyon
Bradi1g51220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 49832864-49833863 Brachypodium distachyon
Bradi1g51220 2.0kb upstream 2.0kb upstream 6575 true Bd1: 49826289-49832863 Brachypodium distachyon
Bradi1g51220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 49826289-49828288 Brachypodium distachyon
Bradi1g51220 2.0kb downstream 2.0kb downstream 6575 true Bd1: 49828289-49834863 Brachypodium distachyon
Bradi1g51220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 49832864-49834863 Brachypodium distachyon
Bradi1g51220 5.0kb upstream 5.0kb upstream 9575 true Bd1: 49823289-49832863 Brachypodium distachyon
Bradi1g51220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 49823289-49828288 Brachypodium distachyon
Bradi1g51220 5.0kb downstream 5.0kb downstream 9575 true Bd1: 49828289-49837863 Brachypodium distachyon
Bradi1g51220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 49832864-49837863 Brachypodium distachyon
Bradi1g51220 10.0kb upstream 10.0kb upstream 14575 true Bd1: 49818289-49832863 Brachypodium distachyon
Bradi1g51220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 49818289-49828288 Brachypodium distachyon
Bradi1g51220 10.0kb downstream 10.0kb downstream 14575 true Bd1: 49828289-49842863 Brachypodium distachyon
Bradi1g51220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 49832864-49842863 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588508 5269 Grass View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.874        
cufflinks 1.299        
cufflinks 1.478        
cufflinks 1.239        
cufflinks 0.862        
cufflinks 1.22        
cufflinks 1.01        
cufflinks 1.151        
cufflinks 1.422        
cufflinks 1.261        
cufflinks 0.783        
cufflinks 1.106        
cufflinks 0.654       Low
cufflinks 0.719        
cufflinks 0.868        
cufflinks 1.19        
cufflinks 1.201        
cufflinks 1.462        
cufflinks 1.06        
cufflinks 0.256       Low
cufflinks 1.704       High
cufflinks 1.012        
cufflinks 1.135        
cufflinks 1.123        
cufflinks 1.12        
cufflinks 1.445        
cufflinks 0.697       Low
cufflinks 1.207        
cufflinks 1.075        
cufflinks 1.418        

0 Strain