Gene : Bradi1g51599 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  6483
Name:  ? Bradi1g51599 Secondary Identifier:  ? PAC:32805329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g51599 0.5kb upstream 0.5kb upstream 4720 true Bd1: 50192083-50196802 Brachypodium distachyon
Bradi1g51599 0.5kb upstream 0.5kb upstream 500 false Bd1: 50196303-50196802 Brachypodium distachyon
Bradi1g51599 0.5kb downstream 0.5kb downstream 4720 true Bd1: 50191583-50196302 Brachypodium distachyon
Bradi1g51599 0.5kb downstream 0.5kb downstream 500 false Bd1: 50191583-50192082 Brachypodium distachyon
Bradi1g51599 1.0kb upstream 1.0kb upstream 5220 true Bd1: 50192083-50197302 Brachypodium distachyon
Bradi1g51599 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50196303-50197302 Brachypodium distachyon
Bradi1g51599 1.0kb downstream 1.0kb downstream 5220 true Bd1: 50191083-50196302 Brachypodium distachyon
Bradi1g51599 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50191083-50192082 Brachypodium distachyon
Bradi1g51599 2.0kb upstream 2.0kb upstream 6220 true Bd1: 50192083-50198302 Brachypodium distachyon
Bradi1g51599 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50196303-50198302 Brachypodium distachyon
Bradi1g51599 2.0kb downstream 2.0kb downstream 6220 true Bd1: 50190083-50196302 Brachypodium distachyon
Bradi1g51599 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50190083-50192082 Brachypodium distachyon
Bradi1g51599 5.0kb upstream 5.0kb upstream 9220 true Bd1: 50192083-50201302 Brachypodium distachyon
Bradi1g51599 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50196303-50201302 Brachypodium distachyon
Bradi1g51599 5.0kb downstream 5.0kb downstream 9220 true Bd1: 50187083-50196302 Brachypodium distachyon
Bradi1g51599 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50187083-50192082 Brachypodium distachyon
Bradi1g51599 10.0kb upstream 10.0kb upstream 14220 true Bd1: 50192083-50206302 Brachypodium distachyon
Bradi1g51599 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50196303-50206302 Brachypodium distachyon
Bradi1g51599 10.0kb downstream 10.0kb downstream 14220 true Bd1: 50182083-50196302 Brachypodium distachyon
Bradi1g51599 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50182083-50192082 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.157       High
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.139       High
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.012     Low  
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.054     Low High
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.008     Low  
cufflinks 0.186       High
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.008     Low  
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain