Gene : Bradi1g52140 B. distachyon v3.1
Defline:  (1 of 2) PTHR13402//PTHR13402:SF12 - RGPR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6550
Name:  ? Bradi1g52140 Secondary Identifier:  ? PAC:32803440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52140 0.5kb upstream 0.5kb upstream 8239 true Bd1: 50680320-50688558 Brachypodium distachyon
Bradi1g52140 0.5kb upstream 0.5kb upstream 500 false Bd1: 50680320-50680819 Brachypodium distachyon
Bradi1g52140 0.5kb downstream 0.5kb downstream 8239 true Bd1: 50680820-50689058 Brachypodium distachyon
Bradi1g52140 0.5kb downstream 0.5kb downstream 500 false Bd1: 50688559-50689058 Brachypodium distachyon
Bradi1g52140 1.0kb upstream 1.0kb upstream 8739 true Bd1: 50679820-50688558 Brachypodium distachyon
Bradi1g52140 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50679820-50680819 Brachypodium distachyon
Bradi1g52140 1.0kb downstream 1.0kb downstream 8739 true Bd1: 50680820-50689558 Brachypodium distachyon
Bradi1g52140 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50688559-50689558 Brachypodium distachyon
Bradi1g52140 2.0kb upstream 2.0kb upstream 9739 true Bd1: 50678820-50688558 Brachypodium distachyon
Bradi1g52140 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50678820-50680819 Brachypodium distachyon
Bradi1g52140 2.0kb downstream 2.0kb downstream 9739 true Bd1: 50680820-50690558 Brachypodium distachyon
Bradi1g52140 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50688559-50690558 Brachypodium distachyon
Bradi1g52140 5.0kb upstream 5.0kb upstream 12739 true Bd1: 50675820-50688558 Brachypodium distachyon
Bradi1g52140 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50675820-50680819 Brachypodium distachyon
Bradi1g52140 5.0kb downstream 5.0kb downstream 12739 true Bd1: 50680820-50693558 Brachypodium distachyon
Bradi1g52140 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50688559-50693558 Brachypodium distachyon
Bradi1g52140 10.0kb upstream 10.0kb upstream 17739 true Bd1: 50670820-50688558 Brachypodium distachyon
Bradi1g52140 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50670820-50680819 Brachypodium distachyon
Bradi1g52140 10.0kb downstream 10.0kb downstream 17739 true Bd1: 50680820-50698558 Brachypodium distachyon
Bradi1g52140 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50688559-50698558 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581045 5269 Grass View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.608        
cufflinks 3.916        
cufflinks 4.06        
cufflinks 2.447        
cufflinks 1.167       Low
cufflinks 3.74        
cufflinks 3.358        
cufflinks 3.383        
cufflinks 3.728        
cufflinks 1.861        
cufflinks 3.133        
cufflinks 3.887        
cufflinks 3.307        
cufflinks 2.184        
cufflinks 2.057        
cufflinks 3.841        
cufflinks 1.475       Low
cufflinks 6.019       High
cufflinks 3.009        
cufflinks 1.273       Low
cufflinks 2.039        
cufflinks 4.348        
cufflinks 3.093        
cufflinks 2.92        
cufflinks 2.319        
cufflinks 3.248        
cufflinks 3.541        
cufflinks 3.183        
cufflinks 3.043        
cufflinks 3.612        

0 Strain