Gene : Bradi1g52160 B. distachyon v3.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF801 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT18-RELATED Genomic Order:  6552
Name:  ? Bradi1g52160 Secondary Identifier:  ? PAC:32805068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52160 0.5kb upstream 0.5kb upstream 6365 true Bd1: 50694167-50700531 Brachypodium distachyon
Bradi1g52160 0.5kb upstream 0.5kb upstream 500 false Bd1: 50700032-50700531 Brachypodium distachyon
Bradi1g52160 0.5kb downstream 0.5kb downstream 6365 true Bd1: 50693667-50700031 Brachypodium distachyon
Bradi1g52160 0.5kb downstream 0.5kb downstream 500 false Bd1: 50693667-50694166 Brachypodium distachyon
Bradi1g52160 1.0kb upstream 1.0kb upstream 6865 true Bd1: 50694167-50701031 Brachypodium distachyon
Bradi1g52160 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50700032-50701031 Brachypodium distachyon
Bradi1g52160 1.0kb downstream 1.0kb downstream 6865 true Bd1: 50693167-50700031 Brachypodium distachyon
Bradi1g52160 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50693167-50694166 Brachypodium distachyon
Bradi1g52160 2.0kb upstream 2.0kb upstream 7865 true Bd1: 50694167-50702031 Brachypodium distachyon
Bradi1g52160 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50700032-50702031 Brachypodium distachyon
Bradi1g52160 2.0kb downstream 2.0kb downstream 7865 true Bd1: 50692167-50700031 Brachypodium distachyon
Bradi1g52160 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50692167-50694166 Brachypodium distachyon
Bradi1g52160 5.0kb upstream 5.0kb upstream 10865 true Bd1: 50694167-50705031 Brachypodium distachyon
Bradi1g52160 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50700032-50705031 Brachypodium distachyon
Bradi1g52160 5.0kb downstream 5.0kb downstream 10865 true Bd1: 50689167-50700031 Brachypodium distachyon
Bradi1g52160 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50689167-50694166 Brachypodium distachyon
Bradi1g52160 10.0kb upstream 10.0kb upstream 15865 true Bd1: 50694167-50710031 Brachypodium distachyon
Bradi1g52160 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50700032-50710031 Brachypodium distachyon
Bradi1g52160 10.0kb downstream 10.0kb downstream 15865 true Bd1: 50684167-50700031 Brachypodium distachyon
Bradi1g52160 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50684167-50694166 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571694 5269 Grass View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.894       Low
cufflinks 2.347        
cufflinks 2.627        
cufflinks 1.909        
cufflinks 1.057       Low
cufflinks 2.143        
cufflinks 2.128        
cufflinks 1.477        
cufflinks 1.968        
cufflinks 1.852        
cufflinks 1.688        
cufflinks 2.461        
cufflinks 1.534        
cufflinks 1.284        
cufflinks 1.011       Low
cufflinks 2.059        
cufflinks 1.786        
cufflinks 2.302        
cufflinks 2.417        
cufflinks 0.472       Low
cufflinks 3.568       High
cufflinks 2.089        
cufflinks 1.486        
cufflinks 1.879        
cufflinks 1.989        
cufflinks 2.347        
cufflinks 1.826        
cufflinks 2.224        
cufflinks 2.209        
cufflinks 4.015       High

0 Strain