Gene : Bradi1g52100 B. distachyon v3.1
Defline:  (1 of 1) K03609 - septum site-determining protein MinD (minD) Genomic Order:  6543
Name:  ? Bradi1g52100 Secondary Identifier:  ? PAC:32792637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g52100 0.5kb upstream 0.5kb upstream 2577 true Bd1: 50625173-50627749 Brachypodium distachyon
Bradi1g52100 0.5kb upstream 0.5kb upstream 500 false Bd1: 50627250-50627749 Brachypodium distachyon
Bradi1g52100 0.5kb downstream 0.5kb downstream 2577 true Bd1: 50624673-50627249 Brachypodium distachyon
Bradi1g52100 0.5kb downstream 0.5kb downstream 500 false Bd1: 50624673-50625172 Brachypodium distachyon
Bradi1g52100 1.0kb upstream 1.0kb upstream 3077 true Bd1: 50625173-50628249 Brachypodium distachyon
Bradi1g52100 1.0kb upstream 1.0kb upstream 1000 false Bd1: 50627250-50628249 Brachypodium distachyon
Bradi1g52100 1.0kb downstream 1.0kb downstream 3077 true Bd1: 50624173-50627249 Brachypodium distachyon
Bradi1g52100 1.0kb downstream 1.0kb downstream 1000 false Bd1: 50624173-50625172 Brachypodium distachyon
Bradi1g52100 2.0kb upstream 2.0kb upstream 4077 true Bd1: 50625173-50629249 Brachypodium distachyon
Bradi1g52100 2.0kb upstream 2.0kb upstream 2000 false Bd1: 50627250-50629249 Brachypodium distachyon
Bradi1g52100 2.0kb downstream 2.0kb downstream 4077 true Bd1: 50623173-50627249 Brachypodium distachyon
Bradi1g52100 2.0kb downstream 2.0kb downstream 2000 false Bd1: 50623173-50625172 Brachypodium distachyon
Bradi1g52100 5.0kb upstream 5.0kb upstream 7077 true Bd1: 50625173-50632249 Brachypodium distachyon
Bradi1g52100 5.0kb upstream 5.0kb upstream 5000 false Bd1: 50627250-50632249 Brachypodium distachyon
Bradi1g52100 5.0kb downstream 5.0kb downstream 7077 true Bd1: 50620173-50627249 Brachypodium distachyon
Bradi1g52100 5.0kb downstream 5.0kb downstream 5000 false Bd1: 50620173-50625172 Brachypodium distachyon
Bradi1g52100 10.0kb upstream 10.0kb upstream 12077 true Bd1: 50625173-50637249 Brachypodium distachyon
Bradi1g52100 10.0kb upstream 10.0kb upstream 10000 false Bd1: 50627250-50637249 Brachypodium distachyon
Bradi1g52100 10.0kb downstream 10.0kb downstream 12077 true Bd1: 50615173-50627249 Brachypodium distachyon
Bradi1g52100 10.0kb downstream 10.0kb downstream 10000 false Bd1: 50615173-50625172 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573423 5269 Grass View MSA
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.476        
cufflinks 5.806        
cufflinks 4.869        
cufflinks 5.191        
cufflinks 1.578        
cufflinks 5.435        
cufflinks 5.77        
cufflinks 4.129        
cufflinks 4.538        
cufflinks 3.185        
cufflinks 0.461       Low
cufflinks 3.497        
cufflinks 0.528       Low
cufflinks 0.472       Low
cufflinks 1.728        
cufflinks 5.214        
cufflinks 7.612       High
cufflinks 3.688        
cufflinks 4.333        
cufflinks 1.339       Low
cufflinks 7.794       High
cufflinks 3.959        
cufflinks 3.408        
cufflinks 3.139        
cufflinks 4.486        
cufflinks 3.976        
cufflinks 0.935       Low
cufflinks 4.012        
cufflinks 3.889        
cufflinks 7.971       High

0 Strain