Gene : Bradi1g57635 B. distachyon v3.1
Defline:  (1 of 1) KOG0388 - SNF2 family DNA-dependent ATPase Genomic Order:  7254
Name:  ? Bradi1g57635 Secondary Identifier:  ? PAC:32792094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g57635 0.5kb upstream 0.5kb upstream 15542 true Bd1: 56615754-56631295 Brachypodium distachyon
Bradi1g57635 0.5kb upstream 0.5kb upstream 500 false Bd1: 56630796-56631295 Brachypodium distachyon
Bradi1g57635 0.5kb downstream 0.5kb downstream 15542 true Bd1: 56615254-56630795 Brachypodium distachyon
Bradi1g57635 0.5kb downstream 0.5kb downstream 500 false Bd1: 56615254-56615753 Brachypodium distachyon
Bradi1g57635 1.0kb upstream 1.0kb upstream 16042 true Bd1: 56615754-56631795 Brachypodium distachyon
Bradi1g57635 1.0kb upstream 1.0kb upstream 1000 false Bd1: 56630796-56631795 Brachypodium distachyon
Bradi1g57635 1.0kb downstream 1.0kb downstream 16042 true Bd1: 56614754-56630795 Brachypodium distachyon
Bradi1g57635 1.0kb downstream 1.0kb downstream 1000 false Bd1: 56614754-56615753 Brachypodium distachyon
Bradi1g57635 2.0kb upstream 2.0kb upstream 17042 true Bd1: 56615754-56632795 Brachypodium distachyon
Bradi1g57635 2.0kb upstream 2.0kb upstream 2000 false Bd1: 56630796-56632795 Brachypodium distachyon
Bradi1g57635 2.0kb downstream 2.0kb downstream 17042 true Bd1: 56613754-56630795 Brachypodium distachyon
Bradi1g57635 2.0kb downstream 2.0kb downstream 2000 false Bd1: 56613754-56615753 Brachypodium distachyon
Bradi1g57635 5.0kb upstream 5.0kb upstream 20042 true Bd1: 56615754-56635795 Brachypodium distachyon
Bradi1g57635 5.0kb upstream 5.0kb upstream 5000 false Bd1: 56630796-56635795 Brachypodium distachyon
Bradi1g57635 5.0kb downstream 5.0kb downstream 20042 true Bd1: 56610754-56630795 Brachypodium distachyon
Bradi1g57635 5.0kb downstream 5.0kb downstream 5000 false Bd1: 56610754-56615753 Brachypodium distachyon
Bradi1g57635 10.0kb upstream 10.0kb upstream 25042 true Bd1: 56615754-56640795 Brachypodium distachyon
Bradi1g57635 10.0kb upstream 10.0kb upstream 10000 false Bd1: 56630796-56640795 Brachypodium distachyon
Bradi1g57635 10.0kb downstream 10.0kb downstream 25042 true Bd1: 56605754-56630795 Brachypodium distachyon
Bradi1g57635 10.0kb downstream 10.0kb downstream 10000 false Bd1: 56605754-56615753 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582188 5269 Grass View MSA
122045682 5273 Angiosperm View MSA
121347848 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.342        
cufflinks 0.886        
cufflinks 0.888        
cufflinks 0.518        
cufflinks 0.138       Low
cufflinks 0.801        
cufflinks 0.694        
cufflinks 0.6        
cufflinks 0.798        
cufflinks 0.388        
cufflinks 0.62        
cufflinks 0.852        
cufflinks 0.604        
cufflinks 0.434        
cufflinks 0.341        
cufflinks 0.793        
cufflinks 0.201       Low
cufflinks 0.805        
cufflinks 0.251        
cufflinks 0.081     Low Low
cufflinks 0.333        
cufflinks 1.062       High
cufflinks 0.647        
cufflinks 0.623        
cufflinks 0.555        
cufflinks 0.741        
cufflinks 0.687        
cufflinks 0.743        
cufflinks 0.791        
cufflinks 0.74        

0 Strain