Gene : Bradi1g58180 B. distachyon v3.1
Defline:  (1 of 1) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  7335
Name:  ? Bradi1g58180 Secondary Identifier:  ? PAC:32802256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58180 0.5kb upstream 0.5kb upstream 6041 true Bd1: 57260169-57266209 Brachypodium distachyon
Bradi1g58180 0.5kb upstream 0.5kb upstream 500 false Bd1: 57260169-57260668 Brachypodium distachyon
Bradi1g58180 0.5kb downstream 0.5kb downstream 6041 true Bd1: 57260669-57266709 Brachypodium distachyon
Bradi1g58180 0.5kb downstream 0.5kb downstream 500 false Bd1: 57266210-57266709 Brachypodium distachyon
Bradi1g58180 1.0kb upstream 1.0kb upstream 6541 true Bd1: 57259669-57266209 Brachypodium distachyon
Bradi1g58180 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57259669-57260668 Brachypodium distachyon
Bradi1g58180 1.0kb downstream 1.0kb downstream 6541 true Bd1: 57260669-57267209 Brachypodium distachyon
Bradi1g58180 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57266210-57267209 Brachypodium distachyon
Bradi1g58180 2.0kb upstream 2.0kb upstream 7541 true Bd1: 57258669-57266209 Brachypodium distachyon
Bradi1g58180 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57258669-57260668 Brachypodium distachyon
Bradi1g58180 2.0kb downstream 2.0kb downstream 7541 true Bd1: 57260669-57268209 Brachypodium distachyon
Bradi1g58180 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57266210-57268209 Brachypodium distachyon
Bradi1g58180 5.0kb upstream 5.0kb upstream 10541 true Bd1: 57255669-57266209 Brachypodium distachyon
Bradi1g58180 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57255669-57260668 Brachypodium distachyon
Bradi1g58180 5.0kb downstream 5.0kb downstream 10541 true Bd1: 57260669-57271209 Brachypodium distachyon
Bradi1g58180 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57266210-57271209 Brachypodium distachyon
Bradi1g58180 10.0kb upstream 10.0kb upstream 15541 true Bd1: 57250669-57266209 Brachypodium distachyon
Bradi1g58180 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57250669-57260668 Brachypodium distachyon
Bradi1g58180 10.0kb downstream 10.0kb downstream 15541 true Bd1: 57260669-57276209 Brachypodium distachyon
Bradi1g58180 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57266210-57276209 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574565 5269 Grass View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.273        
cufflinks 5.958        
cufflinks 6.8        
cufflinks 5.151        
cufflinks 5.12       Low
cufflinks 5.824        
cufflinks 5.542        
cufflinks 5.677        
cufflinks 5.801        
cufflinks 6.032        
cufflinks 7.303        
cufflinks 6.125        
cufflinks 6.166        
cufflinks 6.152        
cufflinks 6.567        
cufflinks 5.753        
cufflinks 6.478        
cufflinks 7.447       High
cufflinks 7.192        
cufflinks 7.515       High
cufflinks 6.08        
cufflinks 7.516       High
cufflinks 5.448        
cufflinks 5.488        
cufflinks 5.213        
cufflinks 7.059        
cufflinks 8.149       High
cufflinks 7.128        
cufflinks 6.994        
cufflinks 6.186        

0 Strain