Gene : Bradi1g58317 B. distachyon v3.1
Defline:  (1 of 3) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  7355
Name:  ? Bradi1g58317 Secondary Identifier:  ? PAC:32793940
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6012-1 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58317 0.5kb upstream 0.5kb upstream 6274 true Bd1: 57353292-57359565 Brachypodium distachyon
Bradi1g58317 0.5kb upstream 0.5kb upstream 500 false Bd1: 57359066-57359565 Brachypodium distachyon
Bradi1g58317 0.5kb downstream 0.5kb downstream 6274 true Bd1: 57352792-57359065 Brachypodium distachyon
Bradi1g58317 0.5kb downstream 0.5kb downstream 500 false Bd1: 57352792-57353291 Brachypodium distachyon
Bradi1g58317 1.0kb upstream 1.0kb upstream 6774 true Bd1: 57353292-57360065 Brachypodium distachyon
Bradi1g58317 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57359066-57360065 Brachypodium distachyon
Bradi1g58317 1.0kb downstream 1.0kb downstream 6774 true Bd1: 57352292-57359065 Brachypodium distachyon
Bradi1g58317 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57352292-57353291 Brachypodium distachyon
Bradi1g58317 2.0kb upstream 2.0kb upstream 7774 true Bd1: 57353292-57361065 Brachypodium distachyon
Bradi1g58317 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57359066-57361065 Brachypodium distachyon
Bradi1g58317 2.0kb downstream 2.0kb downstream 7774 true Bd1: 57351292-57359065 Brachypodium distachyon
Bradi1g58317 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57351292-57353291 Brachypodium distachyon
Bradi1g58317 5.0kb upstream 5.0kb upstream 10774 true Bd1: 57353292-57364065 Brachypodium distachyon
Bradi1g58317 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57359066-57364065 Brachypodium distachyon
Bradi1g58317 5.0kb downstream 5.0kb downstream 10774 true Bd1: 57348292-57359065 Brachypodium distachyon
Bradi1g58317 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57348292-57353291 Brachypodium distachyon
Bradi1g58317 10.0kb upstream 10.0kb upstream 15774 true Bd1: 57353292-57369065 Brachypodium distachyon
Bradi1g58317 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57359066-57369065 Brachypodium distachyon
Bradi1g58317 10.0kb downstream 10.0kb downstream 15774 true Bd1: 57343292-57359065 Brachypodium distachyon
Bradi1g58317 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57343292-57353291 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124469115 5269 Grass Singleton cluster - no MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116       Low
cufflinks 0.22        
cufflinks 0.235        
cufflinks 0.242        
cufflinks 0.092       Low
cufflinks 0.193        
cufflinks 0.201        
cufflinks 0.196        
cufflinks 0.214        
cufflinks 0.204        
cufflinks 0.15        
cufflinks 0.183        
cufflinks 0.106       Low
cufflinks 0.109       Low
cufflinks 0.133        
cufflinks 0.187        
cufflinks 0.167        
cufflinks 0.219        
cufflinks 0.169     Low  
cufflinks 0.048     Low Low
cufflinks 0.164        
cufflinks 0.232        
cufflinks 0.204        
cufflinks 0.194        
cufflinks 0.219        
cufflinks 0.283       High
cufflinks 0.144        
cufflinks 0.253        
cufflinks 0.24        
cufflinks 0.209        

0 Strain