Gene : Bradi1g58360 B. distachyon v3.1
Defline:  (1 of 1) PTHR32227:SF51 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  7360
Name:  ? Bradi1g58360 Secondary Identifier:  ? PAC:32799557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58360 0.5kb upstream 0.5kb upstream 1336 true Bd1: 57403252-57404587 Brachypodium distachyon
Bradi1g58360 0.5kb upstream 0.5kb upstream 500 false Bd1: 57404088-57404587 Brachypodium distachyon
Bradi1g58360 0.5kb downstream 0.5kb downstream 1336 true Bd1: 57402752-57404087 Brachypodium distachyon
Bradi1g58360 0.5kb downstream 0.5kb downstream 500 false Bd1: 57402752-57403251 Brachypodium distachyon
Bradi1g58360 1.0kb upstream 1.0kb upstream 1836 true Bd1: 57403252-57405087 Brachypodium distachyon
Bradi1g58360 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57404088-57405087 Brachypodium distachyon
Bradi1g58360 1.0kb downstream 1.0kb downstream 1836 true Bd1: 57402252-57404087 Brachypodium distachyon
Bradi1g58360 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57402252-57403251 Brachypodium distachyon
Bradi1g58360 2.0kb upstream 2.0kb upstream 2836 true Bd1: 57403252-57406087 Brachypodium distachyon
Bradi1g58360 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57404088-57406087 Brachypodium distachyon
Bradi1g58360 2.0kb downstream 2.0kb downstream 2836 true Bd1: 57401252-57404087 Brachypodium distachyon
Bradi1g58360 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57401252-57403251 Brachypodium distachyon
Bradi1g58360 5.0kb upstream 5.0kb upstream 5836 true Bd1: 57403252-57409087 Brachypodium distachyon
Bradi1g58360 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57404088-57409087 Brachypodium distachyon
Bradi1g58360 5.0kb downstream 5.0kb downstream 5836 true Bd1: 57398252-57404087 Brachypodium distachyon
Bradi1g58360 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57398252-57403251 Brachypodium distachyon
Bradi1g58360 10.0kb upstream 10.0kb upstream 10836 true Bd1: 57403252-57414087 Brachypodium distachyon
Bradi1g58360 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57404088-57414087 Brachypodium distachyon
Bradi1g58360 10.0kb downstream 10.0kb downstream 10836 true Bd1: 57393252-57404087 Brachypodium distachyon
Bradi1g58360 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57393252-57403251 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581988 5269 Grass View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161        
cufflinks 0.245        
cufflinks 0.551        
cufflinks 0.704       High
cufflinks 0.407        
cufflinks 0.252        
cufflinks 0.37        
cufflinks 0.301        
cufflinks 0.121        
cufflinks 0.511        
cufflinks 0.12        
cufflinks 0.165        
cufflinks 0.017     Low Low
cufflinks 0.048     Low Low
cufflinks 0.023     Low Low
cufflinks 0.273        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.77       High
cufflinks 0.079     Low Low
cufflinks 0.418        
cufflinks 0.949       High
cufflinks 0.185        
cufflinks 0.396        
cufflinks 0.271        
cufflinks 0.282        
cufflinks 0.178        
cufflinks 0.149        
cufflinks 0.346        
cufflinks 0.217        
cufflinks 0.793       High

0 Strain