Gene : Bradi1g58470 B. distachyon v3.1
Defline:  (1 of 2) PTHR19332 - PEROXISOMAL MEMBRANE PROTEIN PEX13 Genomic Order:  7374
Name:  ? Bradi1g58470 Secondary Identifier:  ? PAC:32797336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58470 0.5kb upstream 0.5kb upstream 3442 true Bd1: 57520160-57523601 Brachypodium distachyon
Bradi1g58470 0.5kb upstream 0.5kb upstream 500 false Bd1: 57520160-57520659 Brachypodium distachyon
Bradi1g58470 0.5kb downstream 0.5kb downstream 3442 true Bd1: 57520660-57524101 Brachypodium distachyon
Bradi1g58470 0.5kb downstream 0.5kb downstream 500 false Bd1: 57523602-57524101 Brachypodium distachyon
Bradi1g58470 1.0kb upstream 1.0kb upstream 3942 true Bd1: 57519660-57523601 Brachypodium distachyon
Bradi1g58470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57519660-57520659 Brachypodium distachyon
Bradi1g58470 1.0kb downstream 1.0kb downstream 3942 true Bd1: 57520660-57524601 Brachypodium distachyon
Bradi1g58470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57523602-57524601 Brachypodium distachyon
Bradi1g58470 2.0kb upstream 2.0kb upstream 4942 true Bd1: 57518660-57523601 Brachypodium distachyon
Bradi1g58470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57518660-57520659 Brachypodium distachyon
Bradi1g58470 2.0kb downstream 2.0kb downstream 4942 true Bd1: 57520660-57525601 Brachypodium distachyon
Bradi1g58470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57523602-57525601 Brachypodium distachyon
Bradi1g58470 5.0kb upstream 5.0kb upstream 7942 true Bd1: 57515660-57523601 Brachypodium distachyon
Bradi1g58470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57515660-57520659 Brachypodium distachyon
Bradi1g58470 5.0kb downstream 5.0kb downstream 7942 true Bd1: 57520660-57528601 Brachypodium distachyon
Bradi1g58470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57523602-57528601 Brachypodium distachyon
Bradi1g58470 10.0kb upstream 10.0kb upstream 12942 true Bd1: 57510660-57523601 Brachypodium distachyon
Bradi1g58470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57510660-57520659 Brachypodium distachyon
Bradi1g58470 10.0kb downstream 10.0kb downstream 12942 true Bd1: 57520660-57533601 Brachypodium distachyon
Bradi1g58470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57523602-57533601 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568554 5269 Grass View MSA
122050338 5273 Angiosperm View MSA
121346034 5274 Embryophyte View MSA
123428810 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.464     High  
cufflinks 30.745     High  
cufflinks 26.605     High  
cufflinks 26.817     High  
cufflinks 23.06     High  
cufflinks 25.139     High  
cufflinks 29.463     High  
cufflinks 14.227     High Low
cufflinks 18.662     High Low
cufflinks 20.338     High Low
cufflinks 29.287     High  
cufflinks 24.503     High  
cufflinks 25.194     High  
cufflinks 26.012     High  
cufflinks 21.535     High  
cufflinks 23.459     High  
cufflinks 23.995     High  
cufflinks 29.302     High  
cufflinks 39.871     High High
cufflinks 29.973     High  
cufflinks 34.019     High High
cufflinks 16.707     High Low
cufflinks 13.648     High Low
cufflinks 18.413     High Low
cufflinks 26.401     High  
cufflinks 30.492     High  
cufflinks 34.635     High High
cufflinks 27.592     High  
cufflinks 20.061     High Low
cufflinks 34.828     High High

0 Strain