Gene : Bradi1g59020 B. distachyon v3.1
Defline:  (1 of 1) PF12907 - Zinc-binding (zf-met2) Genomic Order:  7466
Name:  ? Bradi1g59020 Secondary Identifier:  ? PAC:32797163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59020 0.5kb upstream 0.5kb upstream 2786 true Bd1: 58335129-58337914 Brachypodium distachyon
Bradi1g59020 0.5kb upstream 0.5kb upstream 500 false Bd1: 58337415-58337914 Brachypodium distachyon
Bradi1g59020 0.5kb downstream 0.5kb downstream 2786 true Bd1: 58334629-58337414 Brachypodium distachyon
Bradi1g59020 0.5kb downstream 0.5kb downstream 500 false Bd1: 58334629-58335128 Brachypodium distachyon
Bradi1g59020 1.0kb upstream 1.0kb upstream 3286 true Bd1: 58335129-58338414 Brachypodium distachyon
Bradi1g59020 1.0kb upstream 1.0kb upstream 1000 false Bd1: 58337415-58338414 Brachypodium distachyon
Bradi1g59020 1.0kb downstream 1.0kb downstream 3286 true Bd1: 58334129-58337414 Brachypodium distachyon
Bradi1g59020 1.0kb downstream 1.0kb downstream 1000 false Bd1: 58334129-58335128 Brachypodium distachyon
Bradi1g59020 2.0kb upstream 2.0kb upstream 4286 true Bd1: 58335129-58339414 Brachypodium distachyon
Bradi1g59020 2.0kb upstream 2.0kb upstream 2000 false Bd1: 58337415-58339414 Brachypodium distachyon
Bradi1g59020 2.0kb downstream 2.0kb downstream 4286 true Bd1: 58333129-58337414 Brachypodium distachyon
Bradi1g59020 2.0kb downstream 2.0kb downstream 2000 false Bd1: 58333129-58335128 Brachypodium distachyon
Bradi1g59020 5.0kb upstream 5.0kb upstream 7286 true Bd1: 58335129-58342414 Brachypodium distachyon
Bradi1g59020 5.0kb upstream 5.0kb upstream 5000 false Bd1: 58337415-58342414 Brachypodium distachyon
Bradi1g59020 5.0kb downstream 5.0kb downstream 7286 true Bd1: 58330129-58337414 Brachypodium distachyon
Bradi1g59020 5.0kb downstream 5.0kb downstream 5000 false Bd1: 58330129-58335128 Brachypodium distachyon
Bradi1g59020 10.0kb upstream 10.0kb upstream 12286 true Bd1: 58335129-58347414 Brachypodium distachyon
Bradi1g59020 10.0kb upstream 10.0kb upstream 10000 false Bd1: 58337415-58347414 Brachypodium distachyon
Bradi1g59020 10.0kb downstream 10.0kb downstream 12286 true Bd1: 58325129-58337414 Brachypodium distachyon
Bradi1g59020 10.0kb downstream 10.0kb downstream 10000 false Bd1: 58325129-58335128 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577578 5269 Grass View MSA
122042016 5273 Angiosperm View MSA
121349419 5274 Embryophyte View MSA
123425398 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.524     High  
cufflinks 73.101     High  
cufflinks 77.314     High  
cufflinks 99.633     High  
cufflinks 100.002     High  
cufflinks 70.507     High Low
cufflinks 79.863     High  
cufflinks 77.385     High  
cufflinks 69.729     High Low
cufflinks 151.663     High High
cufflinks 73.314     High  
cufflinks 70.681     High  
cufflinks 60.524     High Low
cufflinks 81.492     High  
cufflinks 95.957     High  
cufflinks 58.509     High Low
cufflinks 123.29     High  
cufflinks 101.759     High  
cufflinks 156.065     High High
cufflinks 112.86     High  
cufflinks 209.266     High High
cufflinks 66.28     High Low
cufflinks 77.318     High  
cufflinks 82.712     High  
cufflinks 90.444     High  
cufflinks 117.08     High  
cufflinks 72.996     High  
cufflinks 125.347     High  
cufflinks 97.2     High  
cufflinks 119.103     High  

0 Strain