Gene : Bradi1g59440 B. distachyon v3.1
Defline:  (1 of 2) PTHR30546//PTHR30546:SF4 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED Genomic Order:  7520
Name:  ? Bradi1g59440 Secondary Identifier:  ? PAC:32792927
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7279 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59440 0.5kb upstream 0.5kb upstream 1937 true Bd1: 58706822-58708758 Brachypodium distachyon
Bradi1g59440 0.5kb upstream 0.5kb upstream 500 false Bd1: 58708259-58708758 Brachypodium distachyon
Bradi1g59440 0.5kb downstream 0.5kb downstream 1937 true Bd1: 58706322-58708258 Brachypodium distachyon
Bradi1g59440 0.5kb downstream 0.5kb downstream 500 false Bd1: 58706322-58706821 Brachypodium distachyon
Bradi1g59440 1.0kb upstream 1.0kb upstream 2437 true Bd1: 58706822-58709258 Brachypodium distachyon
Bradi1g59440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 58708259-58709258 Brachypodium distachyon
Bradi1g59440 1.0kb downstream 1.0kb downstream 2437 true Bd1: 58705822-58708258 Brachypodium distachyon
Bradi1g59440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 58705822-58706821 Brachypodium distachyon
Bradi1g59440 2.0kb upstream 2.0kb upstream 3437 true Bd1: 58706822-58710258 Brachypodium distachyon
Bradi1g59440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 58708259-58710258 Brachypodium distachyon
Bradi1g59440 2.0kb downstream 2.0kb downstream 3437 true Bd1: 58704822-58708258 Brachypodium distachyon
Bradi1g59440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 58704822-58706821 Brachypodium distachyon
Bradi1g59440 5.0kb upstream 5.0kb upstream 6437 true Bd1: 58706822-58713258 Brachypodium distachyon
Bradi1g59440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 58708259-58713258 Brachypodium distachyon
Bradi1g59440 5.0kb downstream 5.0kb downstream 6437 true Bd1: 58701822-58708258 Brachypodium distachyon
Bradi1g59440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 58701822-58706821 Brachypodium distachyon
Bradi1g59440 10.0kb upstream 10.0kb upstream 11437 true Bd1: 58706822-58718258 Brachypodium distachyon
Bradi1g59440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 58708259-58718258 Brachypodium distachyon
Bradi1g59440 10.0kb downstream 10.0kb downstream 11437 true Bd1: 58696822-58708258 Brachypodium distachyon
Bradi1g59440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 58696822-58706821 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994085 5273 Angiosperm View MSA
124582829 5269 Grass View MSA
121352058 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.958        
cufflinks 0.523        
cufflinks 0.407        
cufflinks 0.61        
cufflinks 1.266        
cufflinks 0.67        
cufflinks 0.654        
cufflinks 1.766       High
cufflinks 1.159        
cufflinks 1.667        
cufflinks 0.116       Low
cufflinks 0.654        
cufflinks 0.641        
cufflinks 0.414        
cufflinks 1.104        
cufflinks 0.774        
cufflinks 0.777        
cufflinks 1.311        
cufflinks 0.92        
cufflinks 2.378       High
cufflinks 2.81       High
cufflinks 1.586        
cufflinks 1.893       High
cufflinks 0.856        
cufflinks 1.058        
cufflinks 0.622        
cufflinks 0.19       Low
cufflinks 0.457        
cufflinks 0.855        
cufflinks 1.711        

0 Strain