Gene : Bradi1g59630 B. distachyon v3.1
Defline:  (1 of 1) PTHR22792//PTHR22792:SF62 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6C Genomic Order:  7545
Name:  ? Bradi1g59630 Secondary Identifier:  ? PAC:32799246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59630 0.5kb upstream 0.5kb upstream 2951 true Bd1: 58873716-58876666 Brachypodium distachyon
Bradi1g59630 0.5kb upstream 0.5kb upstream 500 false Bd1: 58873716-58874215 Brachypodium distachyon
Bradi1g59630 0.5kb downstream 0.5kb downstream 2951 true Bd1: 58874216-58877166 Brachypodium distachyon
Bradi1g59630 0.5kb downstream 0.5kb downstream 500 false Bd1: 58876667-58877166 Brachypodium distachyon
Bradi1g59630 1.0kb upstream 1.0kb upstream 3451 true Bd1: 58873216-58876666 Brachypodium distachyon
Bradi1g59630 1.0kb upstream 1.0kb upstream 1000 false Bd1: 58873216-58874215 Brachypodium distachyon
Bradi1g59630 1.0kb downstream 1.0kb downstream 3451 true Bd1: 58874216-58877666 Brachypodium distachyon
Bradi1g59630 1.0kb downstream 1.0kb downstream 1000 false Bd1: 58876667-58877666 Brachypodium distachyon
Bradi1g59630 2.0kb upstream 2.0kb upstream 4451 true Bd1: 58872216-58876666 Brachypodium distachyon
Bradi1g59630 2.0kb upstream 2.0kb upstream 2000 false Bd1: 58872216-58874215 Brachypodium distachyon
Bradi1g59630 2.0kb downstream 2.0kb downstream 4451 true Bd1: 58874216-58878666 Brachypodium distachyon
Bradi1g59630 2.0kb downstream 2.0kb downstream 2000 false Bd1: 58876667-58878666 Brachypodium distachyon
Bradi1g59630 5.0kb upstream 5.0kb upstream 7451 true Bd1: 58869216-58876666 Brachypodium distachyon
Bradi1g59630 5.0kb upstream 5.0kb upstream 5000 false Bd1: 58869216-58874215 Brachypodium distachyon
Bradi1g59630 5.0kb downstream 5.0kb downstream 7451 true Bd1: 58874216-58881666 Brachypodium distachyon
Bradi1g59630 5.0kb downstream 5.0kb downstream 5000 false Bd1: 58876667-58881666 Brachypodium distachyon
Bradi1g59630 10.0kb upstream 10.0kb upstream 12451 true Bd1: 58864216-58876666 Brachypodium distachyon
Bradi1g59630 10.0kb upstream 10.0kb upstream 10000 false Bd1: 58864216-58874215 Brachypodium distachyon
Bradi1g59630 10.0kb downstream 10.0kb downstream 12451 true Bd1: 58874216-58886666 Brachypodium distachyon
Bradi1g59630 10.0kb downstream 10.0kb downstream 10000 false Bd1: 58876667-58886666 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575109 5269 Grass View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low  
cufflinks 0.016     Low  
cufflinks 0.029     Low  
cufflinks 0.007     Low Low
cufflinks 0.342       High
cufflinks 0.013     Low  
cufflinks 0.039     Low  
cufflinks 0.016     Low  
cufflinks 0.01     Low  
cufflinks 0.038     Low  
cufflinks 0.081        
cufflinks 0.006     Low Low
cufflinks 0.047     Low  
cufflinks 0.036     Low  
cufflinks 0.087        
cufflinks 0.013     Low  
cufflinks 0.018     Low  
cufflinks 0.01     Low  
cufflinks 0.027     Low  
cufflinks 0.402       High
cufflinks 0.007     Low Low
cufflinks 0.049     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.032     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  

0 Strain