Gene : Bradi1g55446 B. distachyon v3.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF213 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  6944
Name:  ? Bradi1g55446 Secondary Identifier:  ? PAC:32801576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g55446 0.5kb upstream 0.5kb upstream 2354 true Bd1: 54089559-54091912 Brachypodium distachyon
Bradi1g55446 0.5kb upstream 0.5kb upstream 500 false Bd1: 54089559-54090058 Brachypodium distachyon
Bradi1g55446 0.5kb downstream 0.5kb downstream 2354 true Bd1: 54090059-54092412 Brachypodium distachyon
Bradi1g55446 0.5kb downstream 0.5kb downstream 500 false Bd1: 54091913-54092412 Brachypodium distachyon
Bradi1g55446 1.0kb upstream 1.0kb upstream 2854 true Bd1: 54089059-54091912 Brachypodium distachyon
Bradi1g55446 1.0kb upstream 1.0kb upstream 1000 false Bd1: 54089059-54090058 Brachypodium distachyon
Bradi1g55446 1.0kb downstream 1.0kb downstream 2854 true Bd1: 54090059-54092912 Brachypodium distachyon
Bradi1g55446 1.0kb downstream 1.0kb downstream 1000 false Bd1: 54091913-54092912 Brachypodium distachyon
Bradi1g55446 2.0kb upstream 2.0kb upstream 3854 true Bd1: 54088059-54091912 Brachypodium distachyon
Bradi1g55446 2.0kb upstream 2.0kb upstream 2000 false Bd1: 54088059-54090058 Brachypodium distachyon
Bradi1g55446 2.0kb downstream 2.0kb downstream 3854 true Bd1: 54090059-54093912 Brachypodium distachyon
Bradi1g55446 2.0kb downstream 2.0kb downstream 2000 false Bd1: 54091913-54093912 Brachypodium distachyon
Bradi1g55446 5.0kb upstream 5.0kb upstream 6854 true Bd1: 54085059-54091912 Brachypodium distachyon
Bradi1g55446 5.0kb upstream 5.0kb upstream 5000 false Bd1: 54085059-54090058 Brachypodium distachyon
Bradi1g55446 5.0kb downstream 5.0kb downstream 6854 true Bd1: 54090059-54096912 Brachypodium distachyon
Bradi1g55446 5.0kb downstream 5.0kb downstream 5000 false Bd1: 54091913-54096912 Brachypodium distachyon
Bradi1g55446 10.0kb upstream 10.0kb upstream 11854 true Bd1: 54080059-54091912 Brachypodium distachyon
Bradi1g55446 10.0kb upstream 10.0kb upstream 10000 false Bd1: 54080059-54090058 Brachypodium distachyon
Bradi1g55446 10.0kb downstream 10.0kb downstream 11854 true Bd1: 54090059-54101912 Brachypodium distachyon
Bradi1g55446 10.0kb downstream 10.0kb downstream 10000 false Bd1: 54091913-54101912 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586675 5269 Grass View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain