Gene : Bradi1g56150 B. distachyon v3.1
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  7046
Name:  ? Bradi1g56150 Secondary Identifier:  ? PAC:32794762
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5046 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56150 0.5kb upstream 0.5kb upstream 4824 true Bd1: 55036720-55041543 Brachypodium distachyon
Bradi1g56150 0.5kb upstream 0.5kb upstream 500 false Bd1: 55036720-55037219 Brachypodium distachyon
Bradi1g56150 0.5kb downstream 0.5kb downstream 4824 true Bd1: 55037220-55042043 Brachypodium distachyon
Bradi1g56150 0.5kb downstream 0.5kb downstream 500 false Bd1: 55041544-55042043 Brachypodium distachyon
Bradi1g56150 1.0kb upstream 1.0kb upstream 5324 true Bd1: 55036220-55041543 Brachypodium distachyon
Bradi1g56150 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55036220-55037219 Brachypodium distachyon
Bradi1g56150 1.0kb downstream 1.0kb downstream 5324 true Bd1: 55037220-55042543 Brachypodium distachyon
Bradi1g56150 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55041544-55042543 Brachypodium distachyon
Bradi1g56150 2.0kb upstream 2.0kb upstream 6324 true Bd1: 55035220-55041543 Brachypodium distachyon
Bradi1g56150 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55035220-55037219 Brachypodium distachyon
Bradi1g56150 2.0kb downstream 2.0kb downstream 6324 true Bd1: 55037220-55043543 Brachypodium distachyon
Bradi1g56150 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55041544-55043543 Brachypodium distachyon
Bradi1g56150 5.0kb upstream 5.0kb upstream 9324 true Bd1: 55032220-55041543 Brachypodium distachyon
Bradi1g56150 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55032220-55037219 Brachypodium distachyon
Bradi1g56150 5.0kb downstream 5.0kb downstream 9324 true Bd1: 55037220-55046543 Brachypodium distachyon
Bradi1g56150 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55041544-55046543 Brachypodium distachyon
Bradi1g56150 10.0kb upstream 10.0kb upstream 14324 true Bd1: 55027220-55041543 Brachypodium distachyon
Bradi1g56150 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55027220-55037219 Brachypodium distachyon
Bradi1g56150 10.0kb downstream 10.0kb downstream 14324 true Bd1: 55037220-55051543 Brachypodium distachyon
Bradi1g56150 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55041544-55051543 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570574 5269 Grass View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.016        
cufflinks 5.778        
cufflinks 7.49        
cufflinks 6.522        
cufflinks 10.124     High  
cufflinks 4.367       Low
cufflinks 4.927        
cufflinks 7.195        
cufflinks 5.347        
cufflinks 11.053     High  
cufflinks 8.063        
cufflinks 4.511        
cufflinks 5.928        
cufflinks 6.618        
cufflinks 7.807        
cufflinks 4.414        
cufflinks 5.242        
cufflinks 3.18       Low
cufflinks 6.856        
cufflinks 24.899     High High
cufflinks 5.486        
cufflinks 8.304        
cufflinks 7.907        
cufflinks 5.368        
cufflinks 4.908        
cufflinks 11.257     High  
cufflinks 11.8     High  
cufflinks 12.142     High  
cufflinks 10.026        
cufflinks 5.894        

0 Strain