Gene : Bradi1g56290 B. distachyon v3.1
Defline:  (1 of 3) PTHR23249 - SYNBINDIN Genomic Order:  7062
Name:  ? Bradi1g56290 Secondary Identifier:  ? PAC:32802944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56290 0.5kb upstream 0.5kb upstream 3761 true Bd1: 55126967-55130727 Brachypodium distachyon
Bradi1g56290 0.5kb upstream 0.5kb upstream 500 false Bd1: 55126967-55127466 Brachypodium distachyon
Bradi1g56290 0.5kb downstream 0.5kb downstream 3761 true Bd1: 55127467-55131227 Brachypodium distachyon
Bradi1g56290 0.5kb downstream 0.5kb downstream 500 false Bd1: 55130728-55131227 Brachypodium distachyon
Bradi1g56290 1.0kb upstream 1.0kb upstream 4261 true Bd1: 55126467-55130727 Brachypodium distachyon
Bradi1g56290 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55126467-55127466 Brachypodium distachyon
Bradi1g56290 1.0kb downstream 1.0kb downstream 4261 true Bd1: 55127467-55131727 Brachypodium distachyon
Bradi1g56290 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55130728-55131727 Brachypodium distachyon
Bradi1g56290 2.0kb upstream 2.0kb upstream 5261 true Bd1: 55125467-55130727 Brachypodium distachyon
Bradi1g56290 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55125467-55127466 Brachypodium distachyon
Bradi1g56290 2.0kb downstream 2.0kb downstream 5261 true Bd1: 55127467-55132727 Brachypodium distachyon
Bradi1g56290 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55130728-55132727 Brachypodium distachyon
Bradi1g56290 5.0kb upstream 5.0kb upstream 8261 true Bd1: 55122467-55130727 Brachypodium distachyon
Bradi1g56290 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55122467-55127466 Brachypodium distachyon
Bradi1g56290 5.0kb downstream 5.0kb downstream 8261 true Bd1: 55127467-55135727 Brachypodium distachyon
Bradi1g56290 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55130728-55135727 Brachypodium distachyon
Bradi1g56290 10.0kb upstream 10.0kb upstream 13261 true Bd1: 55117467-55130727 Brachypodium distachyon
Bradi1g56290 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55117467-55127466 Brachypodium distachyon
Bradi1g56290 10.0kb downstream 10.0kb downstream 13261 true Bd1: 55127467-55140727 Brachypodium distachyon
Bradi1g56290 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55130728-55140727 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587938 5269 Grass View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.714        
cufflinks 4.994        
cufflinks 4.615        
cufflinks 4.36        
cufflinks 3.707        
cufflinks 4.45        
cufflinks 4.631        
cufflinks 3.718        
cufflinks 4.104        
cufflinks 3.498        
cufflinks 1.921       Low
cufflinks 3.971        
cufflinks 1.896       Low
cufflinks 1.819       Low
cufflinks 2.77        
cufflinks 4.599        
cufflinks 5.523        
cufflinks 8.96       High
cufflinks 7.858       High
cufflinks 0.864       Low
cufflinks 7.532       High
cufflinks 3.681        
cufflinks 3.672        
cufflinks 4.237        
cufflinks 4.191        
cufflinks 3.894        
cufflinks 2.14       Low
cufflinks 4.129        
cufflinks 3.571        
cufflinks 7.38       High

0 Strain