Gene : Bradi1g56600 B. distachyon v3.1
Defline:  (1 of 1) PTHR22870:SF175 - ANKYRIN REPEAT AND REGULATOR OF CHROMOSOME CONDENSATION (RCC1) DOMAIN-CONTAINING PROTEIN Genomic Order:  7088
Name:  ? Bradi1g56600 Secondary Identifier:  ? PAC:32794205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56600 0.5kb upstream 0.5kb upstream 8247 true Bd1: 55375618-55383864 Brachypodium distachyon
Bradi1g56600 0.5kb upstream 0.5kb upstream 500 false Bd1: 55375618-55376117 Brachypodium distachyon
Bradi1g56600 0.5kb downstream 0.5kb downstream 8247 true Bd1: 55376118-55384364 Brachypodium distachyon
Bradi1g56600 0.5kb downstream 0.5kb downstream 500 false Bd1: 55383865-55384364 Brachypodium distachyon
Bradi1g56600 1.0kb upstream 1.0kb upstream 8747 true Bd1: 55375118-55383864 Brachypodium distachyon
Bradi1g56600 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55375118-55376117 Brachypodium distachyon
Bradi1g56600 1.0kb downstream 1.0kb downstream 8747 true Bd1: 55376118-55384864 Brachypodium distachyon
Bradi1g56600 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55383865-55384864 Brachypodium distachyon
Bradi1g56600 2.0kb upstream 2.0kb upstream 9747 true Bd1: 55374118-55383864 Brachypodium distachyon
Bradi1g56600 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55374118-55376117 Brachypodium distachyon
Bradi1g56600 2.0kb downstream 2.0kb downstream 9747 true Bd1: 55376118-55385864 Brachypodium distachyon
Bradi1g56600 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55383865-55385864 Brachypodium distachyon
Bradi1g56600 5.0kb upstream 5.0kb upstream 12747 true Bd1: 55371118-55383864 Brachypodium distachyon
Bradi1g56600 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55371118-55376117 Brachypodium distachyon
Bradi1g56600 5.0kb downstream 5.0kb downstream 12747 true Bd1: 55376118-55388864 Brachypodium distachyon
Bradi1g56600 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55383865-55388864 Brachypodium distachyon
Bradi1g56600 10.0kb upstream 10.0kb upstream 17747 true Bd1: 55366118-55383864 Brachypodium distachyon
Bradi1g56600 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55366118-55376117 Brachypodium distachyon
Bradi1g56600 10.0kb downstream 10.0kb downstream 17747 true Bd1: 55376118-55393864 Brachypodium distachyon
Bradi1g56600 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55383865-55393864 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577143 5269 Grass View MSA
122044253 5273 Angiosperm View MSA
121345534 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.848        
cufflinks 6.046        
cufflinks 4.555        
cufflinks 4.88        
cufflinks 2.848        
cufflinks 6.677        
cufflinks 5.137        
cufflinks 6.981        
cufflinks 7.24        
cufflinks 3.485        
cufflinks 7.652       High
cufflinks 6.86        
cufflinks 7.864     High High
cufflinks 6.543        
cufflinks 6.422        
cufflinks 6.602        
cufflinks 3.916        
cufflinks 4.251        
cufflinks 3.374        
cufflinks 1.305       Low
cufflinks 2.37       Low
cufflinks 7.573       High
cufflinks 7.003        
cufflinks 6.39        
cufflinks 4.576        
cufflinks 3.728        
cufflinks 8.039       High
cufflinks 3.503        
cufflinks 4.918        
cufflinks 5.527        

0 Strain