Gene : Bradi1g56800 B. distachyon v3.1
Defline:  (1 of 1) PTHR13345:SF4 - PROTEIN UXT Genomic Order:  7125
Name:  ? Bradi1g56800 Secondary Identifier:  ? PAC:32803049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56800 0.5kb upstream 0.5kb upstream 7044 true Bd1: 55615909-55622952 Brachypodium distachyon
Bradi1g56800 0.5kb upstream 0.5kb upstream 500 false Bd1: 55615909-55616408 Brachypodium distachyon
Bradi1g56800 0.5kb downstream 0.5kb downstream 7044 true Bd1: 55616409-55623452 Brachypodium distachyon
Bradi1g56800 0.5kb downstream 0.5kb downstream 500 false Bd1: 55622953-55623452 Brachypodium distachyon
Bradi1g56800 1.0kb upstream 1.0kb upstream 7544 true Bd1: 55615409-55622952 Brachypodium distachyon
Bradi1g56800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55615409-55616408 Brachypodium distachyon
Bradi1g56800 1.0kb downstream 1.0kb downstream 7544 true Bd1: 55616409-55623952 Brachypodium distachyon
Bradi1g56800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55622953-55623952 Brachypodium distachyon
Bradi1g56800 2.0kb upstream 2.0kb upstream 8544 true Bd1: 55614409-55622952 Brachypodium distachyon
Bradi1g56800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55614409-55616408 Brachypodium distachyon
Bradi1g56800 2.0kb downstream 2.0kb downstream 8544 true Bd1: 55616409-55624952 Brachypodium distachyon
Bradi1g56800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55622953-55624952 Brachypodium distachyon
Bradi1g56800 5.0kb upstream 5.0kb upstream 11544 true Bd1: 55611409-55622952 Brachypodium distachyon
Bradi1g56800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55611409-55616408 Brachypodium distachyon
Bradi1g56800 5.0kb downstream 5.0kb downstream 11544 true Bd1: 55616409-55627952 Brachypodium distachyon
Bradi1g56800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55622953-55627952 Brachypodium distachyon
Bradi1g56800 10.0kb upstream 10.0kb upstream 16544 true Bd1: 55606409-55622952 Brachypodium distachyon
Bradi1g56800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55606409-55616408 Brachypodium distachyon
Bradi1g56800 10.0kb downstream 10.0kb downstream 16544 true Bd1: 55616409-55632952 Brachypodium distachyon
Bradi1g56800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55622953-55632952 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589342 5269 Grass View MSA
122042898 5273 Angiosperm View MSA
121347862 5274 Embryophyte View MSA
123425882 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.824       Low
cufflinks 1.026        
cufflinks 1.566       High
cufflinks 0.985        
cufflinks 0.891        
cufflinks 0.787       Low
cufflinks 1.085        
cufflinks 1.041        
cufflinks 0.942        
cufflinks 1.488        
cufflinks 1.637       High
cufflinks 0.975        
cufflinks 1.0        
cufflinks 1.494        
cufflinks 0.921        
cufflinks 0.922        
cufflinks 0.988        
cufflinks 0.906        
cufflinks 1.629       High
cufflinks 1.031        
cufflinks 1.168        
cufflinks 1.595       High
cufflinks 1.111        
cufflinks 0.972        
cufflinks 0.959        
cufflinks 1.718       High
cufflinks 1.35        
cufflinks 1.986       High
cufflinks 1.767       High
cufflinks 0.938        

0 Strain