Gene : Bradi1g56830 B. distachyon v3.1
Defline:  (1 of 2) PTHR23024//PTHR23024:SF162 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  7131
Name:  ? Bradi1g56830 Secondary Identifier:  ? PAC:32805940
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6303 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56830 0.5kb upstream 0.5kb upstream 1586 true Bd1: 55648396-55649981 Brachypodium distachyon
Bradi1g56830 0.5kb upstream 0.5kb upstream 500 false Bd1: 55649482-55649981 Brachypodium distachyon
Bradi1g56830 0.5kb downstream 0.5kb downstream 1586 true Bd1: 55647896-55649481 Brachypodium distachyon
Bradi1g56830 0.5kb downstream 0.5kb downstream 500 false Bd1: 55647896-55648395 Brachypodium distachyon
Bradi1g56830 1.0kb upstream 1.0kb upstream 2086 true Bd1: 55648396-55650481 Brachypodium distachyon
Bradi1g56830 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55649482-55650481 Brachypodium distachyon
Bradi1g56830 1.0kb downstream 1.0kb downstream 2086 true Bd1: 55647396-55649481 Brachypodium distachyon
Bradi1g56830 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55647396-55648395 Brachypodium distachyon
Bradi1g56830 2.0kb upstream 2.0kb upstream 3086 true Bd1: 55648396-55651481 Brachypodium distachyon
Bradi1g56830 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55649482-55651481 Brachypodium distachyon
Bradi1g56830 2.0kb downstream 2.0kb downstream 3086 true Bd1: 55646396-55649481 Brachypodium distachyon
Bradi1g56830 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55646396-55648395 Brachypodium distachyon
Bradi1g56830 5.0kb upstream 5.0kb upstream 6086 true Bd1: 55648396-55654481 Brachypodium distachyon
Bradi1g56830 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55649482-55654481 Brachypodium distachyon
Bradi1g56830 5.0kb downstream 5.0kb downstream 6086 true Bd1: 55643396-55649481 Brachypodium distachyon
Bradi1g56830 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55643396-55648395 Brachypodium distachyon
Bradi1g56830 10.0kb upstream 10.0kb upstream 11086 true Bd1: 55648396-55659481 Brachypodium distachyon
Bradi1g56830 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55649482-55659481 Brachypodium distachyon
Bradi1g56830 10.0kb downstream 10.0kb downstream 11086 true Bd1: 55638396-55649481 Brachypodium distachyon
Bradi1g56830 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55638396-55648395 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584166 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.013     Low Low
cufflinks 0.027     Low  
cufflinks 0.023     Low  
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.533       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.024     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain