Gene : Bradi1g56860 B. distachyon v3.1
Defline:  (1 of 2) PTHR23024//PTHR23024:SF162 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  7138
Name:  ? Bradi1g56860 Secondary Identifier:  ? PAC:32793425
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6303 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56860 0.5kb upstream 0.5kb upstream 2077 true Bd1: 55710230-55712306 Brachypodium distachyon
Bradi1g56860 0.5kb upstream 0.5kb upstream 500 false Bd1: 55710230-55710729 Brachypodium distachyon
Bradi1g56860 0.5kb downstream 0.5kb downstream 2077 true Bd1: 55710730-55712806 Brachypodium distachyon
Bradi1g56860 0.5kb downstream 0.5kb downstream 500 false Bd1: 55712307-55712806 Brachypodium distachyon
Bradi1g56860 1.0kb upstream 1.0kb upstream 2577 true Bd1: 55709730-55712306 Brachypodium distachyon
Bradi1g56860 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55709730-55710729 Brachypodium distachyon
Bradi1g56860 1.0kb downstream 1.0kb downstream 2577 true Bd1: 55710730-55713306 Brachypodium distachyon
Bradi1g56860 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55712307-55713306 Brachypodium distachyon
Bradi1g56860 2.0kb upstream 2.0kb upstream 3577 true Bd1: 55708730-55712306 Brachypodium distachyon
Bradi1g56860 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55708730-55710729 Brachypodium distachyon
Bradi1g56860 2.0kb downstream 2.0kb downstream 3577 true Bd1: 55710730-55714306 Brachypodium distachyon
Bradi1g56860 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55712307-55714306 Brachypodium distachyon
Bradi1g56860 5.0kb upstream 5.0kb upstream 6577 true Bd1: 55705730-55712306 Brachypodium distachyon
Bradi1g56860 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55705730-55710729 Brachypodium distachyon
Bradi1g56860 5.0kb downstream 5.0kb downstream 6577 true Bd1: 55710730-55717306 Brachypodium distachyon
Bradi1g56860 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55712307-55717306 Brachypodium distachyon
Bradi1g56860 10.0kb upstream 10.0kb upstream 11577 true Bd1: 55700730-55712306 Brachypodium distachyon
Bradi1g56860 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55700730-55710729 Brachypodium distachyon
Bradi1g56860 10.0kb downstream 10.0kb downstream 11577 true Bd1: 55710730-55722306 Brachypodium distachyon
Bradi1g56860 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55712307-55722306 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584166 5269 Grass View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79        
cufflinks 11.745     High  
cufflinks 14.073     High  
cufflinks 8.076        
cufflinks 0.069     Low Low
cufflinks 14.806     High  
cufflinks 18.644     High High
cufflinks 0.577       Low
cufflinks 6.086        
cufflinks 2.491        
cufflinks 16.775     High  
cufflinks 6.375        
cufflinks 14.599     High  
cufflinks 20.228     High High
cufflinks 0.808        
cufflinks 20.899     High High
cufflinks 8.295        
cufflinks 36.375     High High
cufflinks 1.1        
cufflinks 0.31       Low
cufflinks 0.75        
cufflinks 1.968        
cufflinks 0.321       Low
cufflinks 4.763        
cufflinks 10.314     High  
cufflinks 8.474        
cufflinks 5.545        
cufflinks 6.388        
cufflinks 4.384        
cufflinks 0.37       Low

0 Strain