Gene : Bradi1g56937 B. distachyon v3.1
Defline:  (1 of 4) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  7152
Name:  ? Bradi1g56937 Secondary Identifier:  ? PAC:32793615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56937 0.5kb upstream 0.5kb upstream 2600 true Bd1: 55835397-55837996 Brachypodium distachyon
Bradi1g56937 0.5kb upstream 0.5kb upstream 500 false Bd1: 55835397-55835896 Brachypodium distachyon
Bradi1g56937 0.5kb downstream 0.5kb downstream 2600 true Bd1: 55835897-55838496 Brachypodium distachyon
Bradi1g56937 0.5kb downstream 0.5kb downstream 500 false Bd1: 55837997-55838496 Brachypodium distachyon
Bradi1g56937 1.0kb upstream 1.0kb upstream 3100 true Bd1: 55834897-55837996 Brachypodium distachyon
Bradi1g56937 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55834897-55835896 Brachypodium distachyon
Bradi1g56937 1.0kb downstream 1.0kb downstream 3100 true Bd1: 55835897-55838996 Brachypodium distachyon
Bradi1g56937 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55837997-55838996 Brachypodium distachyon
Bradi1g56937 2.0kb upstream 2.0kb upstream 4100 true Bd1: 55833897-55837996 Brachypodium distachyon
Bradi1g56937 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55833897-55835896 Brachypodium distachyon
Bradi1g56937 2.0kb downstream 2.0kb downstream 4100 true Bd1: 55835897-55839996 Brachypodium distachyon
Bradi1g56937 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55837997-55839996 Brachypodium distachyon
Bradi1g56937 5.0kb upstream 5.0kb upstream 7100 true Bd1: 55830897-55837996 Brachypodium distachyon
Bradi1g56937 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55830897-55835896 Brachypodium distachyon
Bradi1g56937 5.0kb downstream 5.0kb downstream 7100 true Bd1: 55835897-55842996 Brachypodium distachyon
Bradi1g56937 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55837997-55842996 Brachypodium distachyon
Bradi1g56937 10.0kb upstream 10.0kb upstream 12100 true Bd1: 55825897-55837996 Brachypodium distachyon
Bradi1g56937 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55825897-55835896 Brachypodium distachyon
Bradi1g56937 10.0kb downstream 10.0kb downstream 12100 true Bd1: 55835897-55847996 Brachypodium distachyon
Bradi1g56937 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55837997-55847996 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574387 5269 Grass View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.017        
cufflinks 9.462        
cufflinks 13.101     High  
cufflinks 10.533     High  
cufflinks 3.827        
cufflinks 7.292        
cufflinks 9.028        
cufflinks 7.639        
cufflinks 7.207        
cufflinks 12.095     High  
cufflinks 7.516        
cufflinks 5.692        
cufflinks 7.727     High  
cufflinks 8.463     High  
cufflinks 4.901        
cufflinks 6.02        
cufflinks 9.14        
cufflinks 0.722       Low
cufflinks 10.227        
cufflinks 1.942       Low
cufflinks 6.547        
cufflinks 9.085        
cufflinks 8.529        
cufflinks 7.145        
cufflinks 7.641        
cufflinks 12.018     High  
cufflinks 1.538       Low
cufflinks 14.998     High High
cufflinks 12.978     High  
cufflinks 5.999        

0 Strain