Gene : Bradi1g62290 B. distachyon v3.1
Defline:  (1 of 1) KOG4709 - Uncharacterized conserved protein Genomic Order:  7886
Name:  ? Bradi1g62290 Secondary Identifier:  ? PAC:32805540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62290 0.5kb upstream 0.5kb upstream 2986 true Bd1: 61753408-61756393 Brachypodium distachyon
Bradi1g62290 0.5kb upstream 0.5kb upstream 500 false Bd1: 61755894-61756393 Brachypodium distachyon
Bradi1g62290 0.5kb downstream 0.5kb downstream 2986 true Bd1: 61752908-61755893 Brachypodium distachyon
Bradi1g62290 0.5kb downstream 0.5kb downstream 500 false Bd1: 61752908-61753407 Brachypodium distachyon
Bradi1g62290 1.0kb upstream 1.0kb upstream 3486 true Bd1: 61753408-61756893 Brachypodium distachyon
Bradi1g62290 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61755894-61756893 Brachypodium distachyon
Bradi1g62290 1.0kb downstream 1.0kb downstream 3486 true Bd1: 61752408-61755893 Brachypodium distachyon
Bradi1g62290 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61752408-61753407 Brachypodium distachyon
Bradi1g62290 2.0kb upstream 2.0kb upstream 4486 true Bd1: 61753408-61757893 Brachypodium distachyon
Bradi1g62290 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61755894-61757893 Brachypodium distachyon
Bradi1g62290 2.0kb downstream 2.0kb downstream 4486 true Bd1: 61751408-61755893 Brachypodium distachyon
Bradi1g62290 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61751408-61753407 Brachypodium distachyon
Bradi1g62290 5.0kb upstream 5.0kb upstream 7486 true Bd1: 61753408-61760893 Brachypodium distachyon
Bradi1g62290 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61755894-61760893 Brachypodium distachyon
Bradi1g62290 5.0kb downstream 5.0kb downstream 7486 true Bd1: 61748408-61755893 Brachypodium distachyon
Bradi1g62290 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61748408-61753407 Brachypodium distachyon
Bradi1g62290 10.0kb upstream 10.0kb upstream 12486 true Bd1: 61753408-61765893 Brachypodium distachyon
Bradi1g62290 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61755894-61765893 Brachypodium distachyon
Bradi1g62290 10.0kb downstream 10.0kb downstream 12486 true Bd1: 61743408-61755893 Brachypodium distachyon
Bradi1g62290 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61743408-61753407 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041503 5273 Angiosperm View MSA
124580069 5269 Grass View MSA
121347582 5274 Embryophyte View MSA
123426889 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.83        
cufflinks 7.987        
cufflinks 7.342        
cufflinks 9.608        
cufflinks 5.643        
cufflinks 7.548        
cufflinks 6.988        
cufflinks 6.098        
cufflinks 7.482        
cufflinks 8.53        
cufflinks 4.884       Low
cufflinks 6.176        
cufflinks 3.128       Low
cufflinks 4.194       Low
cufflinks 5.911        
cufflinks 6.733        
cufflinks 8.791        
cufflinks 9.945        
cufflinks 10.661       High
cufflinks 7.979        
cufflinks 10.716       High
cufflinks 7.435        
cufflinks 6.72        
cufflinks 7.144        
cufflinks 9.465        
cufflinks 8.492        
cufflinks 3.928       Low
cufflinks 7.83        
cufflinks 6.924        
cufflinks 11.002       High

0 Strain