Gene : Bradi5g12570 B. distachyon v3.1
Defline:  (1 of 6) KOG4473 - Uncharacterized membrane protein Genomic Order:  1366
Name:  ? Bradi5g12570 Secondary Identifier:  ? PAC:32807504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g12570 0.5kb upstream 0.5kb upstream 3601 true Bd5: 16169518-16173118 Brachypodium distachyon
Bradi5g12570 0.5kb upstream 0.5kb upstream 500 false Bd5: 16172619-16173118 Brachypodium distachyon
Bradi5g12570 0.5kb downstream 0.5kb downstream 3601 true Bd5: 16169018-16172618 Brachypodium distachyon
Bradi5g12570 0.5kb downstream 0.5kb downstream 500 false Bd5: 16169018-16169517 Brachypodium distachyon
Bradi5g12570 1.0kb upstream 1.0kb upstream 4101 true Bd5: 16169518-16173618 Brachypodium distachyon
Bradi5g12570 1.0kb upstream 1.0kb upstream 1000 false Bd5: 16172619-16173618 Brachypodium distachyon
Bradi5g12570 1.0kb downstream 1.0kb downstream 4101 true Bd5: 16168518-16172618 Brachypodium distachyon
Bradi5g12570 1.0kb downstream 1.0kb downstream 1000 false Bd5: 16168518-16169517 Brachypodium distachyon
Bradi5g12570 2.0kb upstream 2.0kb upstream 5101 true Bd5: 16169518-16174618 Brachypodium distachyon
Bradi5g12570 2.0kb upstream 2.0kb upstream 2000 false Bd5: 16172619-16174618 Brachypodium distachyon
Bradi5g12570 2.0kb downstream 2.0kb downstream 5101 true Bd5: 16167518-16172618 Brachypodium distachyon
Bradi5g12570 2.0kb downstream 2.0kb downstream 2000 false Bd5: 16167518-16169517 Brachypodium distachyon
Bradi5g12570 5.0kb upstream 5.0kb upstream 8101 true Bd5: 16169518-16177618 Brachypodium distachyon
Bradi5g12570 5.0kb upstream 5.0kb upstream 5000 false Bd5: 16172619-16177618 Brachypodium distachyon
Bradi5g12570 5.0kb downstream 5.0kb downstream 8101 true Bd5: 16164518-16172618 Brachypodium distachyon
Bradi5g12570 5.0kb downstream 5.0kb downstream 5000 false Bd5: 16164518-16169517 Brachypodium distachyon
Bradi5g12570 10.0kb upstream 10.0kb upstream 13101 true Bd5: 16169518-16182618 Brachypodium distachyon
Bradi5g12570 10.0kb upstream 10.0kb upstream 10000 false Bd5: 16172619-16182618 Brachypodium distachyon
Bradi5g12570 10.0kb downstream 10.0kb downstream 13101 true Bd5: 16159518-16172618 Brachypodium distachyon
Bradi5g12570 10.0kb downstream 10.0kb downstream 10000 false Bd5: 16159518-16169517 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574925 5269 Grass View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.899       Low
cufflinks 5.347        
cufflinks 7.416        
cufflinks 6.95        
cufflinks 3.833        
cufflinks 4.481        
cufflinks 5.353        
cufflinks 5.3        
cufflinks 4.996        
cufflinks 10.171       High
cufflinks 5.617        
cufflinks 3.622        
cufflinks 4.465        
cufflinks 5.627        
cufflinks 3.234       Low
cufflinks 4.629        
cufflinks 7.512        
cufflinks 8.885       High
cufflinks 6.456        
cufflinks 2.479       Low
cufflinks 8.453       High
cufflinks 6.086        
cufflinks 5.103        
cufflinks 5.355        
cufflinks 5.415        
cufflinks 9.173       High
cufflinks 7.197        
cufflinks 10.464       High
cufflinks 7.427        
cufflinks 4.646        

0 Strain