Gene : Bradi1g62830 B. distachyon v3.1
Defline:  (1 of 2) K02891 - large subunit ribosomal protein L22e (RP-L22e, RPL22) Genomic Order:  7948
Name:  ? Bradi1g62830 Secondary Identifier:  ? PAC:32798250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62830 0.5kb upstream 0.5kb upstream 2040 true Bd1: 62242592-62244631 Brachypodium distachyon
Bradi1g62830 0.5kb upstream 0.5kb upstream 500 false Bd1: 62242592-62243091 Brachypodium distachyon
Bradi1g62830 0.5kb downstream 0.5kb downstream 2040 true Bd1: 62243092-62245131 Brachypodium distachyon
Bradi1g62830 0.5kb downstream 0.5kb downstream 500 false Bd1: 62244632-62245131 Brachypodium distachyon
Bradi1g62830 1.0kb upstream 1.0kb upstream 2540 true Bd1: 62242092-62244631 Brachypodium distachyon
Bradi1g62830 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62242092-62243091 Brachypodium distachyon
Bradi1g62830 1.0kb downstream 1.0kb downstream 2540 true Bd1: 62243092-62245631 Brachypodium distachyon
Bradi1g62830 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62244632-62245631 Brachypodium distachyon
Bradi1g62830 2.0kb upstream 2.0kb upstream 3540 true Bd1: 62241092-62244631 Brachypodium distachyon
Bradi1g62830 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62241092-62243091 Brachypodium distachyon
Bradi1g62830 2.0kb downstream 2.0kb downstream 3540 true Bd1: 62243092-62246631 Brachypodium distachyon
Bradi1g62830 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62244632-62246631 Brachypodium distachyon
Bradi1g62830 5.0kb upstream 5.0kb upstream 6540 true Bd1: 62238092-62244631 Brachypodium distachyon
Bradi1g62830 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62238092-62243091 Brachypodium distachyon
Bradi1g62830 5.0kb downstream 5.0kb downstream 6540 true Bd1: 62243092-62249631 Brachypodium distachyon
Bradi1g62830 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62244632-62249631 Brachypodium distachyon
Bradi1g62830 10.0kb upstream 10.0kb upstream 11540 true Bd1: 62233092-62244631 Brachypodium distachyon
Bradi1g62830 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62233092-62243091 Brachypodium distachyon
Bradi1g62830 10.0kb downstream 10.0kb downstream 11540 true Bd1: 62243092-62254631 Brachypodium distachyon
Bradi1g62830 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62244632-62254631 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586510 5269 Grass View MSA
122045649 5273 Angiosperm View MSA
121348582 5274 Embryophyte View MSA
123423882 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.645     High  
cufflinks 64.518     High  
cufflinks 52.122     High  
cufflinks 87.45     High  
cufflinks 49.523     High  
cufflinks 59.335     High  
cufflinks 61.082     High  
cufflinks 46.901     High  
cufflinks 55.699     High  
cufflinks 92.769     High  
cufflinks 5.102       Low
cufflinks 45.537     High  
cufflinks 3.98       Low
cufflinks 5.236       Low
cufflinks 31.265     High  
cufflinks 56.925     High  
cufflinks 99.905     High  
cufflinks 87.339     High  
cufflinks 75.162     High  
cufflinks 34.1     High  
cufflinks 136.976     High High
cufflinks 41.928     High  
cufflinks 38.12     High  
cufflinks 43.771     High  
cufflinks 71.793     High  
cufflinks 70.636     High  
cufflinks 5.337       Low
cufflinks 60.088     High  
cufflinks 55.355     High  
cufflinks 108.655     High  

0 Strain