Gene : Bradi1g63020 B. distachyon v3.1
Defline:  (1 of 1) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  7975
Name:  ? Bradi1g63020 Secondary Identifier:  ? PAC:32794850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5690 Brachypodium distachyon pathologic  
Bdistachyon PWY-5913 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g63020 0.5kb upstream 0.5kb upstream 8030 true Bd1: 62418557-62426586 Brachypodium distachyon
Bradi1g63020 0.5kb upstream 0.5kb upstream 500 false Bd1: 62426087-62426586 Brachypodium distachyon
Bradi1g63020 0.5kb downstream 0.5kb downstream 8030 true Bd1: 62418057-62426086 Brachypodium distachyon
Bradi1g63020 0.5kb downstream 0.5kb downstream 500 false Bd1: 62418057-62418556 Brachypodium distachyon
Bradi1g63020 1.0kb upstream 1.0kb upstream 8530 true Bd1: 62418557-62427086 Brachypodium distachyon
Bradi1g63020 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62426087-62427086 Brachypodium distachyon
Bradi1g63020 1.0kb downstream 1.0kb downstream 8530 true Bd1: 62417557-62426086 Brachypodium distachyon
Bradi1g63020 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62417557-62418556 Brachypodium distachyon
Bradi1g63020 2.0kb upstream 2.0kb upstream 9530 true Bd1: 62418557-62428086 Brachypodium distachyon
Bradi1g63020 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62426087-62428086 Brachypodium distachyon
Bradi1g63020 2.0kb downstream 2.0kb downstream 9530 true Bd1: 62416557-62426086 Brachypodium distachyon
Bradi1g63020 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62416557-62418556 Brachypodium distachyon
Bradi1g63020 5.0kb upstream 5.0kb upstream 12530 true Bd1: 62418557-62431086 Brachypodium distachyon
Bradi1g63020 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62426087-62431086 Brachypodium distachyon
Bradi1g63020 5.0kb downstream 5.0kb downstream 12530 true Bd1: 62413557-62426086 Brachypodium distachyon
Bradi1g63020 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62413557-62418556 Brachypodium distachyon
Bradi1g63020 10.0kb upstream 10.0kb upstream 17530 true Bd1: 62418557-62436086 Brachypodium distachyon
Bradi1g63020 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62426087-62436086 Brachypodium distachyon
Bradi1g63020 10.0kb downstream 10.0kb downstream 17530 true Bd1: 62408557-62426086 Brachypodium distachyon
Bradi1g63020 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62408557-62418556 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572769 5269 Grass View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.012        
cufflinks 4.248        
cufflinks 4.192        
cufflinks 4.325        
cufflinks 3.021        
cufflinks 3.934        
cufflinks 3.768        
cufflinks 3.386        
cufflinks 3.671        
cufflinks 2.748        
cufflinks 2.084       Low
cufflinks 3.925        
cufflinks 1.829       Low
cufflinks 1.828       Low
cufflinks 3.456        
cufflinks 4.84        
cufflinks 4.299        
cufflinks 9.052       High
cufflinks 3.946        
cufflinks 1.805       Low
cufflinks 6.005       High
cufflinks 3.84        
cufflinks 3.308        
cufflinks 3.885        
cufflinks 4.116        
cufflinks 3.871        
cufflinks 2.831        
cufflinks 3.787        
cufflinks 3.559        
cufflinks 5.324        

0 Strain