Gene : Bradi1g63100 B. distachyon v3.1
Defline:  (1 of 1) PTHR30540//PTHR30540:SF6 - OSMOTIC STRESS POTASSIUM TRANSPORTER // POTASSIUM TRANSPORTER 2 Genomic Order:  7985
Name:  ? Bradi1g63100 Secondary Identifier:  ? PAC:32806221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g63100 0.5kb upstream 0.5kb upstream 6782 true Bd1: 62518253-62525034 Brachypodium distachyon
Bradi1g63100 0.5kb upstream 0.5kb upstream 500 false Bd1: 62524535-62525034 Brachypodium distachyon
Bradi1g63100 0.5kb downstream 0.5kb downstream 6782 true Bd1: 62517753-62524534 Brachypodium distachyon
Bradi1g63100 0.5kb downstream 0.5kb downstream 500 false Bd1: 62517753-62518252 Brachypodium distachyon
Bradi1g63100 1.0kb upstream 1.0kb upstream 7282 true Bd1: 62518253-62525534 Brachypodium distachyon
Bradi1g63100 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62524535-62525534 Brachypodium distachyon
Bradi1g63100 1.0kb downstream 1.0kb downstream 7282 true Bd1: 62517253-62524534 Brachypodium distachyon
Bradi1g63100 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62517253-62518252 Brachypodium distachyon
Bradi1g63100 2.0kb upstream 2.0kb upstream 8282 true Bd1: 62518253-62526534 Brachypodium distachyon
Bradi1g63100 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62524535-62526534 Brachypodium distachyon
Bradi1g63100 2.0kb downstream 2.0kb downstream 8282 true Bd1: 62516253-62524534 Brachypodium distachyon
Bradi1g63100 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62516253-62518252 Brachypodium distachyon
Bradi1g63100 5.0kb upstream 5.0kb upstream 11282 true Bd1: 62518253-62529534 Brachypodium distachyon
Bradi1g63100 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62524535-62529534 Brachypodium distachyon
Bradi1g63100 5.0kb downstream 5.0kb downstream 11282 true Bd1: 62513253-62524534 Brachypodium distachyon
Bradi1g63100 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62513253-62518252 Brachypodium distachyon
Bradi1g63100 10.0kb upstream 10.0kb upstream 16282 true Bd1: 62518253-62534534 Brachypodium distachyon
Bradi1g63100 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62524535-62534534 Brachypodium distachyon
Bradi1g63100 10.0kb downstream 10.0kb downstream 16282 true Bd1: 62508253-62524534 Brachypodium distachyon
Bradi1g63100 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62508253-62518252 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573780 5269 Grass View MSA
122045012 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310386 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.009        
cufflinks 8.623        
cufflinks 11.722     High High
cufflinks 7.382        
cufflinks 5.18        
cufflinks 5.871        
cufflinks 5.948        
cufflinks 9.171     High  
cufflinks 6.782        
cufflinks 8.553        
cufflinks 7.43        
cufflinks 7.78        
cufflinks 6.637        
cufflinks 5.812        
cufflinks 7.994        
cufflinks 6.597        
cufflinks 4.025        
cufflinks 2.239       Low
cufflinks 6.078        
cufflinks 1.097       Low
cufflinks 3.141       Low
cufflinks 15.47     High High
cufflinks 10.159     High  
cufflinks 6.699        
cufflinks 4.691        
cufflinks 10.276        
cufflinks 6.503        
cufflinks 11.088     High High
cufflinks 14.045     High High
cufflinks 7.415        

0 Strain