Gene : Bradi1g63330 B. distachyon v3.1
Defline:  (1 of 1) K14569 - ribosome biogenesis protein BMS1 (BMS1) Genomic Order:  8010
Name:  ? Bradi1g63330 Secondary Identifier:  ? PAC:32806304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g63330 0.5kb upstream 0.5kb upstream 14814 true Bd1: 62719318-62734131 Brachypodium distachyon
Bradi1g63330 0.5kb upstream 0.5kb upstream 500 false Bd1: 62733632-62734131 Brachypodium distachyon
Bradi1g63330 0.5kb downstream 0.5kb downstream 14814 true Bd1: 62718818-62733631 Brachypodium distachyon
Bradi1g63330 0.5kb downstream 0.5kb downstream 500 false Bd1: 62718818-62719317 Brachypodium distachyon
Bradi1g63330 1.0kb upstream 1.0kb upstream 15314 true Bd1: 62719318-62734631 Brachypodium distachyon
Bradi1g63330 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62733632-62734631 Brachypodium distachyon
Bradi1g63330 1.0kb downstream 1.0kb downstream 15314 true Bd1: 62718318-62733631 Brachypodium distachyon
Bradi1g63330 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62718318-62719317 Brachypodium distachyon
Bradi1g63330 2.0kb upstream 2.0kb upstream 16314 true Bd1: 62719318-62735631 Brachypodium distachyon
Bradi1g63330 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62733632-62735631 Brachypodium distachyon
Bradi1g63330 2.0kb downstream 2.0kb downstream 16314 true Bd1: 62717318-62733631 Brachypodium distachyon
Bradi1g63330 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62717318-62719317 Brachypodium distachyon
Bradi1g63330 5.0kb upstream 5.0kb upstream 19314 true Bd1: 62719318-62738631 Brachypodium distachyon
Bradi1g63330 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62733632-62738631 Brachypodium distachyon
Bradi1g63330 5.0kb downstream 5.0kb downstream 19314 true Bd1: 62714318-62733631 Brachypodium distachyon
Bradi1g63330 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62714318-62719317 Brachypodium distachyon
Bradi1g63330 10.0kb upstream 10.0kb upstream 24314 true Bd1: 62719318-62743631 Brachypodium distachyon
Bradi1g63330 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62733632-62743631 Brachypodium distachyon
Bradi1g63330 10.0kb downstream 10.0kb downstream 24314 true Bd1: 62709318-62733631 Brachypodium distachyon
Bradi1g63330 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62709318-62719317 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574767 5269 Grass View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.936        
cufflinks 1.941       High
cufflinks 1.521        
cufflinks 1.364        
cufflinks 0.207       Low
cufflinks 1.658        
cufflinks 1.454        
cufflinks 1.094        
cufflinks 1.376        
cufflinks 0.467        
cufflinks 0.769        
cufflinks 1.226        
cufflinks 0.389        
cufflinks 0.391        
cufflinks 0.548        
cufflinks 1.588        
cufflinks 0.599        
cufflinks 2.605       High
cufflinks 0.706        
cufflinks 0.248       Low
cufflinks 0.702        
cufflinks 1.109        
cufflinks 1.03        
cufflinks 1.022        
cufflinks 1.283        
cufflinks 0.856        
cufflinks 0.491        
cufflinks 0.736        
cufflinks 0.795        
cufflinks 1.345        

0 Strain