Gene : Bradi1g64040 B. distachyon v3.1
Defline:  (1 of 1) PTHR10343//PTHR10343:SF55 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  8100
Name:  ? Bradi1g64040 Secondary Identifier:  ? PAC:32801990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64040 0.5kb upstream 0.5kb upstream 5742 true Bd1: 63468456-63474197 Brachypodium distachyon
Bradi1g64040 0.5kb upstream 0.5kb upstream 500 false Bd1: 63473698-63474197 Brachypodium distachyon
Bradi1g64040 0.5kb downstream 0.5kb downstream 5742 true Bd1: 63467956-63473697 Brachypodium distachyon
Bradi1g64040 0.5kb downstream 0.5kb downstream 500 false Bd1: 63467956-63468455 Brachypodium distachyon
Bradi1g64040 1.0kb upstream 1.0kb upstream 6242 true Bd1: 63468456-63474697 Brachypodium distachyon
Bradi1g64040 1.0kb upstream 1.0kb upstream 1000 false Bd1: 63473698-63474697 Brachypodium distachyon
Bradi1g64040 1.0kb downstream 1.0kb downstream 6242 true Bd1: 63467456-63473697 Brachypodium distachyon
Bradi1g64040 1.0kb downstream 1.0kb downstream 1000 false Bd1: 63467456-63468455 Brachypodium distachyon
Bradi1g64040 2.0kb upstream 2.0kb upstream 7242 true Bd1: 63468456-63475697 Brachypodium distachyon
Bradi1g64040 2.0kb upstream 2.0kb upstream 2000 false Bd1: 63473698-63475697 Brachypodium distachyon
Bradi1g64040 2.0kb downstream 2.0kb downstream 7242 true Bd1: 63466456-63473697 Brachypodium distachyon
Bradi1g64040 2.0kb downstream 2.0kb downstream 2000 false Bd1: 63466456-63468455 Brachypodium distachyon
Bradi1g64040 5.0kb upstream 5.0kb upstream 10242 true Bd1: 63468456-63478697 Brachypodium distachyon
Bradi1g64040 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63473698-63478697 Brachypodium distachyon
Bradi1g64040 5.0kb downstream 5.0kb downstream 10242 true Bd1: 63463456-63473697 Brachypodium distachyon
Bradi1g64040 5.0kb downstream 5.0kb downstream 5000 false Bd1: 63463456-63468455 Brachypodium distachyon
Bradi1g64040 10.0kb upstream 10.0kb upstream 15242 true Bd1: 63468456-63483697 Brachypodium distachyon
Bradi1g64040 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63473698-63483697 Brachypodium distachyon
Bradi1g64040 10.0kb downstream 10.0kb downstream 15242 true Bd1: 63458456-63473697 Brachypodium distachyon
Bradi1g64040 10.0kb downstream 10.0kb downstream 10000 false Bd1: 63458456-63468455 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570321 5269 Grass View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.204        
cufflinks 5.29        
cufflinks 8.761        
cufflinks 5.817        
cufflinks 9.011     High  
cufflinks 5.025       Low
cufflinks 5.331        
cufflinks 5.928        
cufflinks 5.023       Low
cufflinks 14.753     High High
cufflinks 6.597        
cufflinks 4.779       Low
cufflinks 4.938       Low
cufflinks 5.617        
cufflinks 6.207        
cufflinks 4.579       Low
cufflinks 8.316        
cufflinks 12.828     High High
cufflinks 14.142     High High
cufflinks 7.418        
cufflinks 18.06     High High
cufflinks 11.7     High High
cufflinks 6.049        
cufflinks 5.771        
cufflinks 5.517        
cufflinks 11.648     High High
cufflinks 7.271        
cufflinks 13.787     High High
cufflinks 11.906     High High
cufflinks 9.154        

0 Strain