Gene : Bradi1g64300 B. distachyon v3.1
Defline:  (1 of 56) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  8134
Name:  ? Bradi1g64300 Secondary Identifier:  ? PAC:32794072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64300 0.5kb upstream 0.5kb upstream 1862 true Bd1: 63736942-63738803 Brachypodium distachyon
Bradi1g64300 0.5kb upstream 0.5kb upstream 500 false Bd1: 63736942-63737441 Brachypodium distachyon
Bradi1g64300 0.5kb downstream 0.5kb downstream 1862 true Bd1: 63737442-63739303 Brachypodium distachyon
Bradi1g64300 0.5kb downstream 0.5kb downstream 500 false Bd1: 63738804-63739303 Brachypodium distachyon
Bradi1g64300 1.0kb upstream 1.0kb upstream 2362 true Bd1: 63736442-63738803 Brachypodium distachyon
Bradi1g64300 1.0kb upstream 1.0kb upstream 1000 false Bd1: 63736442-63737441 Brachypodium distachyon
Bradi1g64300 1.0kb downstream 1.0kb downstream 2362 true Bd1: 63737442-63739803 Brachypodium distachyon
Bradi1g64300 1.0kb downstream 1.0kb downstream 1000 false Bd1: 63738804-63739803 Brachypodium distachyon
Bradi1g64300 2.0kb upstream 2.0kb upstream 3362 true Bd1: 63735442-63738803 Brachypodium distachyon
Bradi1g64300 2.0kb upstream 2.0kb upstream 2000 false Bd1: 63735442-63737441 Brachypodium distachyon
Bradi1g64300 2.0kb downstream 2.0kb downstream 3362 true Bd1: 63737442-63740803 Brachypodium distachyon
Bradi1g64300 2.0kb downstream 2.0kb downstream 2000 false Bd1: 63738804-63740803 Brachypodium distachyon
Bradi1g64300 5.0kb upstream 5.0kb upstream 6362 true Bd1: 63732442-63738803 Brachypodium distachyon
Bradi1g64300 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63732442-63737441 Brachypodium distachyon
Bradi1g64300 5.0kb downstream 5.0kb downstream 6362 true Bd1: 63737442-63743803 Brachypodium distachyon
Bradi1g64300 5.0kb downstream 5.0kb downstream 5000 false Bd1: 63738804-63743803 Brachypodium distachyon
Bradi1g64300 10.0kb upstream 10.0kb upstream 11362 true Bd1: 63727442-63738803 Brachypodium distachyon
Bradi1g64300 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63727442-63737441 Brachypodium distachyon
Bradi1g64300 10.0kb downstream 10.0kb downstream 11362 true Bd1: 63737442-63748803 Brachypodium distachyon
Bradi1g64300 10.0kb downstream 10.0kb downstream 10000 false Bd1: 63738804-63748803 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993377 5273 Angiosperm View MSA
124577922 5269 Grass View MSA
121263662 5274 Embryophyte View MSA
123302178 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.033     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.038     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.017     Low  
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112     Low  
cufflinks 0.229       High
cufflinks 0.049     Low  
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.012     Low Low
cufflinks 0.025     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  

0 Strain