Gene : Bradi1g59910 B. distachyon v3.1
Defline:  (1 of 1) PTHR14190:SF7 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG Genomic Order:  7581
Name:  ? Bradi1g59910 Secondary Identifier:  ? PAC:32797861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59910 0.5kb upstream 0.5kb upstream 12810 true Bd1: 59109199-59122008 Brachypodium distachyon
Bradi1g59910 0.5kb upstream 0.5kb upstream 500 false Bd1: 59121509-59122008 Brachypodium distachyon
Bradi1g59910 0.5kb downstream 0.5kb downstream 12810 true Bd1: 59108699-59121508 Brachypodium distachyon
Bradi1g59910 0.5kb downstream 0.5kb downstream 500 false Bd1: 59108699-59109198 Brachypodium distachyon
Bradi1g59910 1.0kb upstream 1.0kb upstream 13310 true Bd1: 59109199-59122508 Brachypodium distachyon
Bradi1g59910 1.0kb upstream 1.0kb upstream 1000 false Bd1: 59121509-59122508 Brachypodium distachyon
Bradi1g59910 1.0kb downstream 1.0kb downstream 13310 true Bd1: 59108199-59121508 Brachypodium distachyon
Bradi1g59910 1.0kb downstream 1.0kb downstream 1000 false Bd1: 59108199-59109198 Brachypodium distachyon
Bradi1g59910 2.0kb upstream 2.0kb upstream 14310 true Bd1: 59109199-59123508 Brachypodium distachyon
Bradi1g59910 2.0kb upstream 2.0kb upstream 2000 false Bd1: 59121509-59123508 Brachypodium distachyon
Bradi1g59910 2.0kb downstream 2.0kb downstream 14310 true Bd1: 59107199-59121508 Brachypodium distachyon
Bradi1g59910 2.0kb downstream 2.0kb downstream 2000 false Bd1: 59107199-59109198 Brachypodium distachyon
Bradi1g59910 5.0kb upstream 5.0kb upstream 17310 true Bd1: 59109199-59126508 Brachypodium distachyon
Bradi1g59910 5.0kb upstream 5.0kb upstream 5000 false Bd1: 59121509-59126508 Brachypodium distachyon
Bradi1g59910 5.0kb downstream 5.0kb downstream 17310 true Bd1: 59104199-59121508 Brachypodium distachyon
Bradi1g59910 5.0kb downstream 5.0kb downstream 5000 false Bd1: 59104199-59109198 Brachypodium distachyon
Bradi1g59910 10.0kb upstream 10.0kb upstream 22310 true Bd1: 59109199-59131508 Brachypodium distachyon
Bradi1g59910 10.0kb upstream 10.0kb upstream 10000 false Bd1: 59121509-59131508 Brachypodium distachyon
Bradi1g59910 10.0kb downstream 10.0kb downstream 22310 true Bd1: 59099199-59121508 Brachypodium distachyon
Bradi1g59910 10.0kb downstream 10.0kb downstream 10000 false Bd1: 59099199-59109198 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575507 5269 Grass View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.225        
cufflinks 1.821        
cufflinks 2.079        
cufflinks 1.763        
cufflinks 1.339        
cufflinks 1.763        
cufflinks 1.564        
cufflinks 1.347        
cufflinks 1.696        
cufflinks 1.589        
cufflinks 1.238        
cufflinks 1.592        
cufflinks 0.989        
cufflinks 0.967       Low
cufflinks 1.195        
cufflinks 1.735        
cufflinks 1.527        
cufflinks 3.604       High
cufflinks 1.66        
cufflinks 0.552       Low
cufflinks 2.693       High
cufflinks 1.842        
cufflinks 1.39        
cufflinks 1.723        
cufflinks 1.605        
cufflinks 2.023        
cufflinks 1.176        
cufflinks 1.922        
cufflinks 1.795        
cufflinks 2.874       High

0 Strain