Gene : Bradi1g59982 B. distachyon v3.1
Defline:  (1 of 2) PF07897//PF16135//PF16136 - Ethylene-responsive binding factor-associated repression (EAR) // TPL-binding domain in jasmonate signalling (Jas) // Putative nuclear localisation signal (NINJA_B) Genomic Order:  7590
Name:  ? Bradi1g59982 Secondary Identifier:  ? PAC:32798765
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59982 0.5kb upstream 0.5kb upstream 8836 true Bd1: 59276526-59285361 Brachypodium distachyon
Bradi1g59982 0.5kb upstream 0.5kb upstream 500 false Bd1: 59284862-59285361 Brachypodium distachyon
Bradi1g59982 0.5kb downstream 0.5kb downstream 8836 true Bd1: 59276026-59284861 Brachypodium distachyon
Bradi1g59982 0.5kb downstream 0.5kb downstream 500 false Bd1: 59276026-59276525 Brachypodium distachyon
Bradi1g59982 1.0kb upstream 1.0kb upstream 9336 true Bd1: 59276526-59285861 Brachypodium distachyon
Bradi1g59982 1.0kb upstream 1.0kb upstream 1000 false Bd1: 59284862-59285861 Brachypodium distachyon
Bradi1g59982 1.0kb downstream 1.0kb downstream 9336 true Bd1: 59275526-59284861 Brachypodium distachyon
Bradi1g59982 1.0kb downstream 1.0kb downstream 1000 false Bd1: 59275526-59276525 Brachypodium distachyon
Bradi1g59982 2.0kb upstream 2.0kb upstream 10336 true Bd1: 59276526-59286861 Brachypodium distachyon
Bradi1g59982 2.0kb upstream 2.0kb upstream 2000 false Bd1: 59284862-59286861 Brachypodium distachyon
Bradi1g59982 2.0kb downstream 2.0kb downstream 10336 true Bd1: 59274526-59284861 Brachypodium distachyon
Bradi1g59982 2.0kb downstream 2.0kb downstream 2000 false Bd1: 59274526-59276525 Brachypodium distachyon
Bradi1g59982 5.0kb upstream 5.0kb upstream 13336 true Bd1: 59276526-59289861 Brachypodium distachyon
Bradi1g59982 5.0kb upstream 5.0kb upstream 5000 false Bd1: 59284862-59289861 Brachypodium distachyon
Bradi1g59982 5.0kb downstream 5.0kb downstream 13336 true Bd1: 59271526-59284861 Brachypodium distachyon
Bradi1g59982 5.0kb downstream 5.0kb downstream 5000 false Bd1: 59271526-59276525 Brachypodium distachyon
Bradi1g59982 10.0kb upstream 10.0kb upstream 18336 true Bd1: 59276526-59294861 Brachypodium distachyon
Bradi1g59982 10.0kb upstream 10.0kb upstream 10000 false Bd1: 59284862-59294861 Brachypodium distachyon
Bradi1g59982 10.0kb downstream 10.0kb downstream 18336 true Bd1: 59266526-59284861 Brachypodium distachyon
Bradi1g59982 10.0kb downstream 10.0kb downstream 10000 false Bd1: 59266526-59276525 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587117 5269 Grass View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.076        
cufflinks 0.629        
cufflinks 0.63        
cufflinks 0.666        
cufflinks 0.967        
cufflinks 0.729        
cufflinks 0.65        
cufflinks 0.576       Low
cufflinks 0.674        
cufflinks 0.768        
cufflinks 1.126       High
cufflinks 0.603       Low
cufflinks 0.745        
cufflinks 0.916        
cufflinks 0.884        
cufflinks 0.73        
cufflinks 0.687        
cufflinks 0.909        
cufflinks 1.008        
cufflinks 1.354       High
cufflinks 0.877        
cufflinks 0.695        
cufflinks 0.679        
cufflinks 0.642        
cufflinks 0.745        
cufflinks 0.651        
cufflinks 1.479       High
cufflinks 0.638        
cufflinks 0.798        
cufflinks 0.68        

0 Strain