Gene : Bradi5g13810 B. distachyon v3.1
Defline:  (1 of 1) PTHR10257//PTHR10257:SF21 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B // SUBFAMILY NOT NAMED Genomic Order:  1525
Name:  ? Bradi5g13810 Secondary Identifier:  ? PAC:32811375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g13810 0.5kb upstream 0.5kb upstream 4223 true Bd5: 17422874-17427096 Brachypodium distachyon
Bradi5g13810 0.5kb upstream 0.5kb upstream 500 false Bd5: 17426597-17427096 Brachypodium distachyon
Bradi5g13810 0.5kb downstream 0.5kb downstream 4223 true Bd5: 17422374-17426596 Brachypodium distachyon
Bradi5g13810 0.5kb downstream 0.5kb downstream 500 false Bd5: 17422374-17422873 Brachypodium distachyon
Bradi5g13810 1.0kb upstream 1.0kb upstream 4723 true Bd5: 17422874-17427596 Brachypodium distachyon
Bradi5g13810 1.0kb upstream 1.0kb upstream 1000 false Bd5: 17426597-17427596 Brachypodium distachyon
Bradi5g13810 1.0kb downstream 1.0kb downstream 4723 true Bd5: 17421874-17426596 Brachypodium distachyon
Bradi5g13810 1.0kb downstream 1.0kb downstream 1000 false Bd5: 17421874-17422873 Brachypodium distachyon
Bradi5g13810 2.0kb upstream 2.0kb upstream 5723 true Bd5: 17422874-17428596 Brachypodium distachyon
Bradi5g13810 2.0kb upstream 2.0kb upstream 2000 false Bd5: 17426597-17428596 Brachypodium distachyon
Bradi5g13810 2.0kb downstream 2.0kb downstream 5723 true Bd5: 17420874-17426596 Brachypodium distachyon
Bradi5g13810 2.0kb downstream 2.0kb downstream 2000 false Bd5: 17420874-17422873 Brachypodium distachyon
Bradi5g13810 5.0kb upstream 5.0kb upstream 8723 true Bd5: 17422874-17431596 Brachypodium distachyon
Bradi5g13810 5.0kb upstream 5.0kb upstream 5000 false Bd5: 17426597-17431596 Brachypodium distachyon
Bradi5g13810 5.0kb downstream 5.0kb downstream 8723 true Bd5: 17417874-17426596 Brachypodium distachyon
Bradi5g13810 5.0kb downstream 5.0kb downstream 5000 false Bd5: 17417874-17422873 Brachypodium distachyon
Bradi5g13810 10.0kb upstream 10.0kb upstream 13723 true Bd5: 17422874-17436596 Brachypodium distachyon
Bradi5g13810 10.0kb upstream 10.0kb upstream 10000 false Bd5: 17426597-17436596 Brachypodium distachyon
Bradi5g13810 10.0kb downstream 10.0kb downstream 13723 true Bd5: 17412874-17426596 Brachypodium distachyon
Bradi5g13810 10.0kb downstream 10.0kb downstream 10000 false Bd5: 17412874-17422873 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568687 5269 Grass View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.158        
cufflinks 10.83     High  
cufflinks 9.783        
cufflinks 8.698        
cufflinks 4.01       Low
cufflinks 10.02     High  
cufflinks 9.224        
cufflinks 9.006        
cufflinks 9.299        
cufflinks 6.438        
cufflinks 3.878       Low
cufflinks 10.49     High  
cufflinks 4.836        
cufflinks 3.802       Low
cufflinks 6.73        
cufflinks 10.44     High  
cufflinks 7.319        
cufflinks 15.006     High High
cufflinks 8.208        
cufflinks 2.228       Low
cufflinks 13.686     High High
cufflinks 9.874        
cufflinks 9.334     High  
cufflinks 8.5        
cufflinks 8.904        
cufflinks 9.747        
cufflinks 5.997        
cufflinks 8.392        
cufflinks 8.99        
cufflinks 15.56     High High

0 Strain