Gene : Bradi1g60217 B. distachyon v3.1
Defline:  (1 of 1) PTHR23423:SF10 - TRANSMEMBRANE PROTEIN 184C Genomic Order:  7624
Name:  ? Bradi1g60217 Secondary Identifier:  ? PAC:32806187
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g60217 0.5kb upstream 0.5kb upstream 4564 true Bd1: 59723087-59727650 Brachypodium distachyon
Bradi1g60217 0.5kb upstream 0.5kb upstream 500 false Bd1: 59727151-59727650 Brachypodium distachyon
Bradi1g60217 0.5kb downstream 0.5kb downstream 4564 true Bd1: 59722587-59727150 Brachypodium distachyon
Bradi1g60217 0.5kb downstream 0.5kb downstream 500 false Bd1: 59722587-59723086 Brachypodium distachyon
Bradi1g60217 1.0kb upstream 1.0kb upstream 5064 true Bd1: 59723087-59728150 Brachypodium distachyon
Bradi1g60217 1.0kb upstream 1.0kb upstream 1000 false Bd1: 59727151-59728150 Brachypodium distachyon
Bradi1g60217 1.0kb downstream 1.0kb downstream 5064 true Bd1: 59722087-59727150 Brachypodium distachyon
Bradi1g60217 1.0kb downstream 1.0kb downstream 1000 false Bd1: 59722087-59723086 Brachypodium distachyon
Bradi1g60217 2.0kb upstream 2.0kb upstream 6064 true Bd1: 59723087-59729150 Brachypodium distachyon
Bradi1g60217 2.0kb upstream 2.0kb upstream 2000 false Bd1: 59727151-59729150 Brachypodium distachyon
Bradi1g60217 2.0kb downstream 2.0kb downstream 6064 true Bd1: 59721087-59727150 Brachypodium distachyon
Bradi1g60217 2.0kb downstream 2.0kb downstream 2000 false Bd1: 59721087-59723086 Brachypodium distachyon
Bradi1g60217 5.0kb upstream 5.0kb upstream 9064 true Bd1: 59723087-59732150 Brachypodium distachyon
Bradi1g60217 5.0kb upstream 5.0kb upstream 5000 false Bd1: 59727151-59732150 Brachypodium distachyon
Bradi1g60217 5.0kb downstream 5.0kb downstream 9064 true Bd1: 59718087-59727150 Brachypodium distachyon
Bradi1g60217 5.0kb downstream 5.0kb downstream 5000 false Bd1: 59718087-59723086 Brachypodium distachyon
Bradi1g60217 10.0kb upstream 10.0kb upstream 14064 true Bd1: 59723087-59737150 Brachypodium distachyon
Bradi1g60217 10.0kb upstream 10.0kb upstream 10000 false Bd1: 59727151-59737150 Brachypodium distachyon
Bradi1g60217 10.0kb downstream 10.0kb downstream 14064 true Bd1: 59713087-59727150 Brachypodium distachyon
Bradi1g60217 10.0kb downstream 10.0kb downstream 10000 false Bd1: 59713087-59723086 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026542 5273 Angiosperm View MSA
124571464 5269 Grass View MSA
121296376 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378        
cufflinks 0.526        
cufflinks 0.635        
cufflinks 0.405        
cufflinks 0.453        
cufflinks 0.292        
cufflinks 0.398        
cufflinks 0.437        
cufflinks 0.422        
cufflinks 0.625        
cufflinks 0.038     Low Low
cufflinks 0.367        
cufflinks 0.036     Low Low
cufflinks 0.043     Low Low
cufflinks 0.275        
cufflinks 0.544        
cufflinks 0.271        
cufflinks 0.96       High
cufflinks 0.783        
cufflinks 0.692        
cufflinks 0.098     Low Low
cufflinks 0.675        
cufflinks 0.51        
cufflinks 0.295        
cufflinks 0.452        
cufflinks 0.566        
cufflinks 0.025     Low Low
cufflinks 0.56        
cufflinks 0.731        
cufflinks 0.882        

0 Strain