Gene : Bradi5g13760 B. distachyon v3.1
Defline:  (1 of 13) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  1520
Name:  ? Bradi5g13760 Secondary Identifier:  ? PAC:32811445
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5080 Brachypodium distachyon pathologic  
Bdistachyon PWY-6433 Brachypodium distachyon pathologic  
Bdistachyon PWY-6598 Brachypodium distachyon pathologic  
Bdistachyon PWY-7036 Brachypodium distachyon pathologic  
Bdistachyon PWY-7601 Brachypodium distachyon pathologic  
Bdistachyon PWY-7606 Brachypodium distachyon pathologic  
Bdistachyon PWY-7619 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g13760 0.5kb upstream 0.5kb upstream 4587 true Bd5: 17388042-17392628 Brachypodium distachyon
Bradi5g13760 0.5kb upstream 0.5kb upstream 500 false Bd5: 17392129-17392628 Brachypodium distachyon
Bradi5g13760 0.5kb downstream 0.5kb downstream 4587 true Bd5: 17387542-17392128 Brachypodium distachyon
Bradi5g13760 0.5kb downstream 0.5kb downstream 500 false Bd5: 17387542-17388041 Brachypodium distachyon
Bradi5g13760 1.0kb upstream 1.0kb upstream 5087 true Bd5: 17388042-17393128 Brachypodium distachyon
Bradi5g13760 1.0kb upstream 1.0kb upstream 1000 false Bd5: 17392129-17393128 Brachypodium distachyon
Bradi5g13760 1.0kb downstream 1.0kb downstream 5087 true Bd5: 17387042-17392128 Brachypodium distachyon
Bradi5g13760 1.0kb downstream 1.0kb downstream 1000 false Bd5: 17387042-17388041 Brachypodium distachyon
Bradi5g13760 2.0kb upstream 2.0kb upstream 6087 true Bd5: 17388042-17394128 Brachypodium distachyon
Bradi5g13760 2.0kb upstream 2.0kb upstream 2000 false Bd5: 17392129-17394128 Brachypodium distachyon
Bradi5g13760 2.0kb downstream 2.0kb downstream 6087 true Bd5: 17386042-17392128 Brachypodium distachyon
Bradi5g13760 2.0kb downstream 2.0kb downstream 2000 false Bd5: 17386042-17388041 Brachypodium distachyon
Bradi5g13760 5.0kb upstream 5.0kb upstream 9087 true Bd5: 17388042-17397128 Brachypodium distachyon
Bradi5g13760 5.0kb upstream 5.0kb upstream 5000 false Bd5: 17392129-17397128 Brachypodium distachyon
Bradi5g13760 5.0kb downstream 5.0kb downstream 9087 true Bd5: 17383042-17392128 Brachypodium distachyon
Bradi5g13760 5.0kb downstream 5.0kb downstream 5000 false Bd5: 17383042-17388041 Brachypodium distachyon
Bradi5g13760 10.0kb upstream 10.0kb upstream 14087 true Bd5: 17388042-17402128 Brachypodium distachyon
Bradi5g13760 10.0kb upstream 10.0kb upstream 10000 false Bd5: 17392129-17402128 Brachypodium distachyon
Bradi5g13760 10.0kb downstream 10.0kb downstream 14087 true Bd5: 17378042-17392128 Brachypodium distachyon
Bradi5g13760 10.0kb downstream 10.0kb downstream 10000 false Bd5: 17378042-17388041 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994780 5273 Angiosperm View MSA
124585632 5269 Grass View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145        
cufflinks 0.196        
cufflinks 0.342        
cufflinks 0.271        
cufflinks 0.195        
cufflinks 0.234        
cufflinks 0.248        
cufflinks 0.258        
cufflinks 0.334        
cufflinks 0.251        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.176        
cufflinks 0.182        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.356        
cufflinks 0.147        
cufflinks 0.349        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.391        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.597       High
cufflinks 0.259        
cufflinks 0.247        
cufflinks 0.34        
cufflinks 0.316        
cufflinks 0.261        
cufflinks 0.184        
cufflinks 0.3        
cufflinks 0.385        
cufflinks 2.027       High

0 Strain