Gene : Bradi1g60440 B. distachyon v3.1
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  7655
Name:  ? Bradi1g60440 Secondary Identifier:  ? PAC:32799925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g60440 0.5kb upstream 0.5kb upstream 5672 true Bd1: 60023495-60029166 Brachypodium distachyon
Bradi1g60440 0.5kb upstream 0.5kb upstream 500 false Bd1: 60028667-60029166 Brachypodium distachyon
Bradi1g60440 0.5kb downstream 0.5kb downstream 5672 true Bd1: 60022995-60028666 Brachypodium distachyon
Bradi1g60440 0.5kb downstream 0.5kb downstream 500 false Bd1: 60022995-60023494 Brachypodium distachyon
Bradi1g60440 1.0kb upstream 1.0kb upstream 6172 true Bd1: 60023495-60029666 Brachypodium distachyon
Bradi1g60440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 60028667-60029666 Brachypodium distachyon
Bradi1g60440 1.0kb downstream 1.0kb downstream 6172 true Bd1: 60022495-60028666 Brachypodium distachyon
Bradi1g60440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 60022495-60023494 Brachypodium distachyon
Bradi1g60440 2.0kb upstream 2.0kb upstream 7172 true Bd1: 60023495-60030666 Brachypodium distachyon
Bradi1g60440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 60028667-60030666 Brachypodium distachyon
Bradi1g60440 2.0kb downstream 2.0kb downstream 7172 true Bd1: 60021495-60028666 Brachypodium distachyon
Bradi1g60440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 60021495-60023494 Brachypodium distachyon
Bradi1g60440 5.0kb upstream 5.0kb upstream 10172 true Bd1: 60023495-60033666 Brachypodium distachyon
Bradi1g60440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 60028667-60033666 Brachypodium distachyon
Bradi1g60440 5.0kb downstream 5.0kb downstream 10172 true Bd1: 60018495-60028666 Brachypodium distachyon
Bradi1g60440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 60018495-60023494 Brachypodium distachyon
Bradi1g60440 10.0kb upstream 10.0kb upstream 15172 true Bd1: 60023495-60038666 Brachypodium distachyon
Bradi1g60440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 60028667-60038666 Brachypodium distachyon
Bradi1g60440 10.0kb downstream 10.0kb downstream 15172 true Bd1: 60013495-60028666 Brachypodium distachyon
Bradi1g60440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 60013495-60023494 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572135 5269 Grass View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.087       High
cufflinks 3.708        
cufflinks 3.565       Low
cufflinks 4.404        
cufflinks 6.792       High
cufflinks 4.056        
cufflinks 3.671       Low
cufflinks 4.611        
cufflinks 5.184        
cufflinks 4.793        
cufflinks 5.362        
cufflinks 5.98        
cufflinks 3.014       Low
cufflinks 4.086        
cufflinks 5.207        
cufflinks 4.188        
cufflinks 5.246        
cufflinks 11.507       High
cufflinks 8.044       High
cufflinks 4.321        
cufflinks 6.139        
cufflinks 4.794        
cufflinks 4.351        
cufflinks 5.045        
cufflinks 4.179        
cufflinks 4.746        
cufflinks 4.056        
cufflinks 4.441        
cufflinks 3.971        
cufflinks 5.165        

0 Strain