Gene : Bradi1g60800 B. distachyon v3.1

Defline:  (1 of 10) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  7708
Name:  ? Bradi1g60800 Secondary Identifier:  ? PAC:32802670

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g60800 0.5kb upstream 0.5kb upstream 2454 true Bd1: 60396823-60399276 Brachypodium distachyon
Bradi1g60800 0.5kb upstream 0.5kb upstream 500 false Bd1: 60396823-60397322 Brachypodium distachyon
Bradi1g60800 0.5kb downstream 0.5kb downstream 2454 true Bd1: 60397323-60399776 Brachypodium distachyon
Bradi1g60800 0.5kb downstream 0.5kb downstream 500 false Bd1: 60399277-60399776 Brachypodium distachyon
Bradi1g60800 1.0kb upstream 1.0kb upstream 2954 true Bd1: 60396323-60399276 Brachypodium distachyon
Bradi1g60800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 60396323-60397322 Brachypodium distachyon
Bradi1g60800 1.0kb downstream 1.0kb downstream 2954 true Bd1: 60397323-60400276 Brachypodium distachyon
Bradi1g60800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 60399277-60400276 Brachypodium distachyon
Bradi1g60800 2.0kb upstream 2.0kb upstream 3954 true Bd1: 60395323-60399276 Brachypodium distachyon
Bradi1g60800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 60395323-60397322 Brachypodium distachyon
Bradi1g60800 2.0kb downstream 2.0kb downstream 3954 true Bd1: 60397323-60401276 Brachypodium distachyon
Bradi1g60800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 60399277-60401276 Brachypodium distachyon
Bradi1g60800 5.0kb upstream 5.0kb upstream 6954 true Bd1: 60392323-60399276 Brachypodium distachyon
Bradi1g60800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 60392323-60397322 Brachypodium distachyon
Bradi1g60800 5.0kb downstream 5.0kb downstream 6954 true Bd1: 60397323-60404276 Brachypodium distachyon
Bradi1g60800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 60399277-60404276 Brachypodium distachyon
Bradi1g60800 10.0kb upstream 10.0kb upstream 11954 true Bd1: 60387323-60399276 Brachypodium distachyon
Bradi1g60800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 60387323-60397322 Brachypodium distachyon
Bradi1g60800 10.0kb downstream 10.0kb downstream 11954 true Bd1: 60397323-60409276 Brachypodium distachyon
Bradi1g60800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 60399277-60409276 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994792 5273 Angiosperm View MSA
124585668 5269 Grass View MSA
123428899 5275 Viridiplantae View MSA
121265007 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 153.738     High  
cufflinks 223.438     High  
cufflinks 262.368     High  
cufflinks 186.302     High  
cufflinks 151.403     High  
cufflinks 187.305     High  
cufflinks 297.602     High  
cufflinks 220.573     High  
cufflinks 201.363     High  
cufflinks 239.95     High  
cufflinks 719.921     High High
cufflinks 120.821     High  
cufflinks 332.857     High  
cufflinks 560.812     High High
cufflinks 150.246     High  
cufflinks 228.948     High  
cufflinks 118.458     High  
cufflinks 249.748     High  
cufflinks 112.382     High  
cufflinks 231.712     High  
cufflinks 175.936     High  
cufflinks 210.333     High  
cufflinks 206.201     High  
cufflinks 155.819     High  
cufflinks 158.706     High  
cufflinks 230.824     High  
cufflinks 453.499     High High
cufflinks 339.013     High  
cufflinks 250.365     High  
cufflinks 36.668     High Low

0 Strain