Gene : Bradi5g13510 B. distachyon v3.1
Defline:  (1 of 1) PTHR12802//PTHR12802:SF2 - SWI/SNF COMPLEX-RELATED // SWI/SNF COMPLEX SUBUNIT SWI3A Genomic Order:  1487
Name:  ? Bradi5g13510 Secondary Identifier:  ? PAC:32808285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g13510 0.5kb upstream 0.5kb upstream 5544 true Bd5: 17208160-17213703 Brachypodium distachyon
Bradi5g13510 0.5kb upstream 0.5kb upstream 500 false Bd5: 17208160-17208659 Brachypodium distachyon
Bradi5g13510 0.5kb downstream 0.5kb downstream 5544 true Bd5: 17208660-17214203 Brachypodium distachyon
Bradi5g13510 0.5kb downstream 0.5kb downstream 500 false Bd5: 17213704-17214203 Brachypodium distachyon
Bradi5g13510 1.0kb upstream 1.0kb upstream 6044 true Bd5: 17207660-17213703 Brachypodium distachyon
Bradi5g13510 1.0kb upstream 1.0kb upstream 1000 false Bd5: 17207660-17208659 Brachypodium distachyon
Bradi5g13510 1.0kb downstream 1.0kb downstream 6044 true Bd5: 17208660-17214703 Brachypodium distachyon
Bradi5g13510 1.0kb downstream 1.0kb downstream 1000 false Bd5: 17213704-17214703 Brachypodium distachyon
Bradi5g13510 2.0kb upstream 2.0kb upstream 7044 true Bd5: 17206660-17213703 Brachypodium distachyon
Bradi5g13510 2.0kb upstream 2.0kb upstream 2000 false Bd5: 17206660-17208659 Brachypodium distachyon
Bradi5g13510 2.0kb downstream 2.0kb downstream 7044 true Bd5: 17208660-17215703 Brachypodium distachyon
Bradi5g13510 2.0kb downstream 2.0kb downstream 2000 false Bd5: 17213704-17215703 Brachypodium distachyon
Bradi5g13510 5.0kb upstream 5.0kb upstream 10044 true Bd5: 17203660-17213703 Brachypodium distachyon
Bradi5g13510 5.0kb upstream 5.0kb upstream 5000 false Bd5: 17203660-17208659 Brachypodium distachyon
Bradi5g13510 5.0kb downstream 5.0kb downstream 10044 true Bd5: 17208660-17218703 Brachypodium distachyon
Bradi5g13510 5.0kb downstream 5.0kb downstream 5000 false Bd5: 17213704-17218703 Brachypodium distachyon
Bradi5g13510 10.0kb upstream 10.0kb upstream 15044 true Bd5: 17198660-17213703 Brachypodium distachyon
Bradi5g13510 10.0kb upstream 10.0kb upstream 10000 false Bd5: 17198660-17208659 Brachypodium distachyon
Bradi5g13510 10.0kb downstream 10.0kb downstream 15044 true Bd5: 17208660-17223703 Brachypodium distachyon
Bradi5g13510 10.0kb downstream 10.0kb downstream 10000 false Bd5: 17213704-17223703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585134 5269 Grass View MSA
122044148 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.193        
cufflinks 3.633        
cufflinks 3.252        
cufflinks 3.191        
cufflinks 2.494        
cufflinks 4.097        
cufflinks 3.702        
cufflinks 3.784        
cufflinks 3.753        
cufflinks 2.748        
cufflinks 3.041        
cufflinks 3.454        
cufflinks 2.12        
cufflinks 2.366        
cufflinks 2.098        
cufflinks 4.091        
cufflinks 3.11        
cufflinks 6.183       High
cufflinks 3.414        
cufflinks 4.084        
cufflinks 3.356        
cufflinks 3.586        
cufflinks 3.54        
cufflinks 3.259        
cufflinks 3.022        
cufflinks 2.812        
cufflinks 2.614        
cufflinks 2.384        
cufflinks 2.574        
cufflinks 4.655       High

0 Strain