Gene : Bradi1g60960 B. distachyon v3.1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  7725
Name:  ? Bradi1g60960 Secondary Identifier:  ? PAC:32799341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g60960 0.5kb upstream 0.5kb upstream 4913 true Bd1: 60557886-60562798 Brachypodium distachyon
Bradi1g60960 0.5kb upstream 0.5kb upstream 500 false Bd1: 60562299-60562798 Brachypodium distachyon
Bradi1g60960 0.5kb downstream 0.5kb downstream 4913 true Bd1: 60557386-60562298 Brachypodium distachyon
Bradi1g60960 0.5kb downstream 0.5kb downstream 500 false Bd1: 60557386-60557885 Brachypodium distachyon
Bradi1g60960 1.0kb upstream 1.0kb upstream 5413 true Bd1: 60557886-60563298 Brachypodium distachyon
Bradi1g60960 1.0kb upstream 1.0kb upstream 1000 false Bd1: 60562299-60563298 Brachypodium distachyon
Bradi1g60960 1.0kb downstream 1.0kb downstream 5413 true Bd1: 60556886-60562298 Brachypodium distachyon
Bradi1g60960 1.0kb downstream 1.0kb downstream 1000 false Bd1: 60556886-60557885 Brachypodium distachyon
Bradi1g60960 2.0kb upstream 2.0kb upstream 6413 true Bd1: 60557886-60564298 Brachypodium distachyon
Bradi1g60960 2.0kb upstream 2.0kb upstream 2000 false Bd1: 60562299-60564298 Brachypodium distachyon
Bradi1g60960 2.0kb downstream 2.0kb downstream 6413 true Bd1: 60555886-60562298 Brachypodium distachyon
Bradi1g60960 2.0kb downstream 2.0kb downstream 2000 false Bd1: 60555886-60557885 Brachypodium distachyon
Bradi1g60960 5.0kb upstream 5.0kb upstream 9413 true Bd1: 60557886-60567298 Brachypodium distachyon
Bradi1g60960 5.0kb upstream 5.0kb upstream 5000 false Bd1: 60562299-60567298 Brachypodium distachyon
Bradi1g60960 5.0kb downstream 5.0kb downstream 9413 true Bd1: 60552886-60562298 Brachypodium distachyon
Bradi1g60960 5.0kb downstream 5.0kb downstream 5000 false Bd1: 60552886-60557885 Brachypodium distachyon
Bradi1g60960 10.0kb upstream 10.0kb upstream 14413 true Bd1: 60557886-60572298 Brachypodium distachyon
Bradi1g60960 10.0kb upstream 10.0kb upstream 10000 false Bd1: 60562299-60572298 Brachypodium distachyon
Bradi1g60960 10.0kb downstream 10.0kb downstream 14413 true Bd1: 60547886-60562298 Brachypodium distachyon
Bradi1g60960 10.0kb downstream 10.0kb downstream 10000 false Bd1: 60547886-60557885 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569547 5269 Grass View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.167     High  
cufflinks 0.64       Low
cufflinks 0.978       Low
cufflinks 1.049       Low
cufflinks 44.738     High High
cufflinks 5.014        
cufflinks 1.813        
cufflinks 23.05     High High
cufflinks 10.699     High  
cufflinks 14.25     High  
cufflinks 21.632     High  
cufflinks 22.894     High High
cufflinks 12.102     High  
cufflinks 16.11     High  
cufflinks 30.385     High High
cufflinks 4.728        
cufflinks 8.871        
cufflinks 1.088       Low
cufflinks 10.712        
cufflinks 41.879     High High
cufflinks 1.055       Low
cufflinks 21.001     High  
cufflinks 21.95     High  
cufflinks 10.214     High  
cufflinks 4.646        
cufflinks 1.413       Low
cufflinks 14.493     High  
cufflinks 3.851        
cufflinks 10.515        
cufflinks 0.926       Low

0 Strain