Gene : Bradi5g13034 B. distachyon v3.1
Defline:  (1 of 1) PTHR12668//PTHR12668:SF16 - TRANSMEMBRANE PROTEIN 14, 15 Genomic Order:  1424
Name:  ? Bradi5g13034 Secondary Identifier:  ? PAC:32808276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g13034 0.5kb upstream 0.5kb upstream 6436 true Bd5: 16729894-16736329 Brachypodium distachyon
Bradi5g13034 0.5kb upstream 0.5kb upstream 500 false Bd5: 16735830-16736329 Brachypodium distachyon
Bradi5g13034 0.5kb downstream 0.5kb downstream 6436 true Bd5: 16729394-16735829 Brachypodium distachyon
Bradi5g13034 0.5kb downstream 0.5kb downstream 500 false Bd5: 16729394-16729893 Brachypodium distachyon
Bradi5g13034 1.0kb upstream 1.0kb upstream 6936 true Bd5: 16729894-16736829 Brachypodium distachyon
Bradi5g13034 1.0kb upstream 1.0kb upstream 1000 false Bd5: 16735830-16736829 Brachypodium distachyon
Bradi5g13034 1.0kb downstream 1.0kb downstream 6936 true Bd5: 16728894-16735829 Brachypodium distachyon
Bradi5g13034 1.0kb downstream 1.0kb downstream 1000 false Bd5: 16728894-16729893 Brachypodium distachyon
Bradi5g13034 2.0kb upstream 2.0kb upstream 7936 true Bd5: 16729894-16737829 Brachypodium distachyon
Bradi5g13034 2.0kb upstream 2.0kb upstream 2000 false Bd5: 16735830-16737829 Brachypodium distachyon
Bradi5g13034 2.0kb downstream 2.0kb downstream 7936 true Bd5: 16727894-16735829 Brachypodium distachyon
Bradi5g13034 2.0kb downstream 2.0kb downstream 2000 false Bd5: 16727894-16729893 Brachypodium distachyon
Bradi5g13034 5.0kb upstream 5.0kb upstream 10936 true Bd5: 16729894-16740829 Brachypodium distachyon
Bradi5g13034 5.0kb upstream 5.0kb upstream 5000 false Bd5: 16735830-16740829 Brachypodium distachyon
Bradi5g13034 5.0kb downstream 5.0kb downstream 10936 true Bd5: 16724894-16735829 Brachypodium distachyon
Bradi5g13034 5.0kb downstream 5.0kb downstream 5000 false Bd5: 16724894-16729893 Brachypodium distachyon
Bradi5g13034 10.0kb upstream 10.0kb upstream 15936 true Bd5: 16729894-16745829 Brachypodium distachyon
Bradi5g13034 10.0kb upstream 10.0kb upstream 10000 false Bd5: 16735830-16745829 Brachypodium distachyon
Bradi5g13034 10.0kb downstream 10.0kb downstream 15936 true Bd5: 16719894-16735829 Brachypodium distachyon
Bradi5g13034 10.0kb downstream 10.0kb downstream 10000 false Bd5: 16719894-16729893 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576968 5269 Grass View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86        
cufflinks 2.182        
cufflinks 1.919        
cufflinks 2.327        
cufflinks 1.662        
cufflinks 1.997        
cufflinks 1.938        
cufflinks 2.214        
cufflinks 2.183        
cufflinks 1.505       Low
cufflinks 2.575       High
cufflinks 2.01        
cufflinks 1.786        
cufflinks 2.364        
cufflinks 2.272        
cufflinks 2.121        
cufflinks 2.201        
cufflinks 2.037        
cufflinks 2.116        
cufflinks 0.907       Low
cufflinks 1.874        
cufflinks 1.698        
cufflinks 2.2        
cufflinks 2.071        
cufflinks 1.961        
cufflinks 1.905        
cufflinks 2.348        
cufflinks 1.751        
cufflinks 1.899        
cufflinks 1.743        

0 Strain