Gene : Bradi1g61810 B. distachyon v3.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED Genomic Order:  7828
Name:  ? Bradi1g61810 Secondary Identifier:  ? PAC:32797146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g61810 0.5kb upstream 0.5kb upstream 2178 true Bd1: 61348152-61350329 Brachypodium distachyon
Bradi1g61810 0.5kb upstream 0.5kb upstream 500 false Bd1: 61349830-61350329 Brachypodium distachyon
Bradi1g61810 0.5kb downstream 0.5kb downstream 2178 true Bd1: 61347652-61349829 Brachypodium distachyon
Bradi1g61810 0.5kb downstream 0.5kb downstream 500 false Bd1: 61347652-61348151 Brachypodium distachyon
Bradi1g61810 1.0kb upstream 1.0kb upstream 2678 true Bd1: 61348152-61350829 Brachypodium distachyon
Bradi1g61810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61349830-61350829 Brachypodium distachyon
Bradi1g61810 1.0kb downstream 1.0kb downstream 2678 true Bd1: 61347152-61349829 Brachypodium distachyon
Bradi1g61810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61347152-61348151 Brachypodium distachyon
Bradi1g61810 2.0kb upstream 2.0kb upstream 3678 true Bd1: 61348152-61351829 Brachypodium distachyon
Bradi1g61810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61349830-61351829 Brachypodium distachyon
Bradi1g61810 2.0kb downstream 2.0kb downstream 3678 true Bd1: 61346152-61349829 Brachypodium distachyon
Bradi1g61810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61346152-61348151 Brachypodium distachyon
Bradi1g61810 5.0kb upstream 5.0kb upstream 6678 true Bd1: 61348152-61354829 Brachypodium distachyon
Bradi1g61810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61349830-61354829 Brachypodium distachyon
Bradi1g61810 5.0kb downstream 5.0kb downstream 6678 true Bd1: 61343152-61349829 Brachypodium distachyon
Bradi1g61810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61343152-61348151 Brachypodium distachyon
Bradi1g61810 10.0kb upstream 10.0kb upstream 11678 true Bd1: 61348152-61359829 Brachypodium distachyon
Bradi1g61810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61349830-61359829 Brachypodium distachyon
Bradi1g61810 10.0kb downstream 10.0kb downstream 11678 true Bd1: 61338152-61349829 Brachypodium distachyon
Bradi1g61810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61338152-61348151 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576776 5269 Grass View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.474        
cufflinks 5.359        
cufflinks 7.806        
cufflinks 6.639        
cufflinks 6.772        
cufflinks 13.275     High  
cufflinks 14.383     High  
cufflinks 14.391     High  
cufflinks 16.43     High  
cufflinks 36.217     High High
cufflinks 23.822     High  
cufflinks 4.144        
cufflinks 23.702     High  
cufflinks 33.429     High High
cufflinks 5.118        
cufflinks 14.491     High  
cufflinks 19.603     High  
cufflinks 0.513       Low
cufflinks 9.542        
cufflinks 9.636        
cufflinks 12.039     High  
cufflinks 10.411     High  
cufflinks 17.66     High  
cufflinks 18.722     High  
cufflinks 20.971     High  
cufflinks 8.994        
cufflinks 25.236     High  
cufflinks 19.458     High  
cufflinks 20.677     High  
cufflinks 2.713       Low

0 Strain